| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1002 |
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| Symbol | |
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| ID | 8413874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1130826 |
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| End bp | 1131773 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022591 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003180022 |
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| Protein GI | 257784805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTACG GTCTTTTAAG CGGTATTCTT TGGGCGGTTG ATACCGTTAT TCTCGGTGTT
GCTCTTGGTA TGAGTCCTTA TGTTGATTCA GCTCAGGCGT CATTTGCCAG TGCATTCATG
CACGATTTCT TTGCCGCTGC AGTTCTTTTA GTCATGATGG CTCAGAAAGG CAGACTTAAA
GACACCCTTG AGGCAGCAAA AACAAAGAGT GGCCGTGTAG TCATGCTTGG CGCACTCCTG
GGTGGACCAA TTGGTATGAG TGGTTACCTA GCTGCTATTA ACACCATTGG ACCTGGCTAC
ACCGCTGCAA TTTCAGCTTT TTATCCTGCA GTTGGTTCGG TTTTAGCATG GCTTTTGCTC
AAAGAAAAGA TGAACTTAAA GCAGGTTATT GCTCTTATTG TTGCTCTTGT TGGTGTCATG
GTTATTGGTC TCTCAACAGC AGCAGGCGAG GGTAACGGAA ACGTTCTTGT GGGTATCTTG
GGCGTTGCTG CTTGTGTCTT TGGCTGGGGC TCTGAGGCGG TTATTTTGGC TTGGGGTATG
CAAGACGATG CTGTTGATAA TGAGACTGCT CTTCAGATTA GGGAAACCAC CTCTGCATTT
GCATACGGCC TTCTCGTCTT GCCATTGGCT GGTTCCGTTG ATTTTGCTGC ACAGGTTGCA
CTAACTCCTG CTAATGGCGT TGTCTTTATT GCTGCTCTTG CAGGTACTGC CTCATATCTC
TTTTACTACA AGGCAATTGA CGCCATTGGC GCTTCTCGCG GTATGGCACT GAACATTTCT
TACTCTGCGT GGTCGGTAAT TTTTGCGGCT CTTGCAGGTA TTATCTTGCC AGCAATTATG
CCTGAAGCAA TTCCATCTCC ACTGGTTGTA ATTTGCTGCA TTGTCATTAT TGTAGGAACG
GTTCTTTCTG CAACTCCAGA CTGGAGTGAG CTCTTTAGTA AAGAATAG
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| Protein sequence | MYYGLLSGIL WAVDTVILGV ALGMSPYVDS AQASFASAFM HDFFAAAVLL VMMAQKGRLK
DTLEAAKTKS GRVVMLGALL GGPIGMSGYL AAINTIGPGY TAAISAFYPA VGSVLAWLLL
KEKMNLKQVI ALIVALVGVM VIGLSTAAGE GNGNVLVGIL GVAACVFGWG SEAVILAWGM
QDDAVDNETA LQIRETTSAF AYGLLVLPLA GSVDFAAQVA LTPANGVVFI AALAGTASYL
FYYKAIDAIG ASRGMALNIS YSAWSVIFAA LAGIILPAIM PEAIPSPLVV ICCIVIIVGT
VLSATPDWSE LFSKE
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