| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0994 |
|---|
| Symbol | |
|---|
| ID | 8413866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 1122862 |
|---|
| End bp | 1123098 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 645022583 |
|---|
| Product | nitrogen-fixing NifU domain protein |
|---|
| Protein accession | YP_003180014 |
|---|
| Protein GI | 257784797 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0694] Thioredoxin-like proteins and domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTA ATCGTGACCT TTTGAATGCA ACCCTTGATG TTATTCGTCA GAGCCTTCAG
ACTGACGGTG GTGACGTTGA ACTTATTGAC GTTAGCGATG ACGGTACCGT TACCCTTGAG
ATGGTTGGTT CTTGTGCTGG CTGTCCTATG TCTGCATACG ATATGTCTGA GGGCATCGAG
CGTATCCTGA TTGAGCACGT TCCTGGCGTT AAGCGCGTTC AGCCTGCAAT GCTGTAA
|
|---|
| Protein sequence | MAINRDLLNA TLDVIRQSLQ TDGGDVELID VSDDGTVTLE MVGSCAGCPM SAYDMSEGIE
RILIEHVPGV KRVQPAML
|
|---|
| |