| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0982 |
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| Symbol | |
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| ID | 8413854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1109209 |
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| End bp | 1110237 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022571 |
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| Product | degV family protein |
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| Protein accession | YP_003180002 |
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| Protein GI | 257784785 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATA AAAAAGATAA TGCCGAAGAA GAAATTAGCG AGGTTGCGTT TGAAGATCTT
GAGCCTACTG AGCTTTCACC TGTATACCAT AAGCCCAGTA ACGTTCGAAT CATCATGGAC
TCCTGCGCAG ATTTTGCTCC AGGAATTGCT GAACAGCTAG GTGTTGATAT CATCCAGTTC
CCTTATGTGG GACCAGATGG AGAGCACTAT GACGATGGCT GGAAGAGCAT TAGTGCGCAT
GAGTTTTTTG AGGGAATGCG CAAGGATAAG AAGCTGCGCT ACACCACCTC TGCAATTACT
CCTGGTCATT ACTTTGAAGT CTTTGAGCAT GCTGCAAAAC AAGGTACGCC AACAGTGTAT
CTTTGCTTTA CCTCTGCTCT CTCTTCATCA TTTTATGCAG CCGAGCAAGC AGCAGATATG
GTAAGAGAGA AATACCCAGA CTTTGAGATT TACGTAGTTG ACAACGGCGC TCCTTCGTCT
GCTGCTCAGC TTTTGGGTCT TGAGGCAGTA CATCAGGCCA ATAAGGGTCT CTCGGCAAAA
GAAGTTGCTG AGTGGGCAAA AGATGCGCGC AACTATATTC AAGGTTATTT TACGCTTGAG
ACTTTGGATG CTCTTGCTGC AGGTGGTCGT ATTCCTGCTG CTGCGGCAAA CATTGGTGGC
AAACTTGATG TGAAGCCAGA ACTTACGTAT GACTCAACAG GAGCTCTTAC TGTTAAGACT
GTGTGCAGAG GCCGTAAGAA GGCGCTCAAG TCTTTAATTC AGGACTTTAG AGATAGCTAT
TCTCATGATA CTTCACTTCC TGTTGGCATT ATTTCAGCAG ATGCGCAGAA GGATGCCAAT
TGGCTAGAGG CTCAGATTCG TAAGGAGAAG GGCTGTGAGG GACTCACTAT TATTCATAGT
CAGGTAGGAC CGGTCATTGG CGCTCACGTT GGTCCAGGCA TGGTAGCTAT TGTCTTTTGG
GGAACTGATC GCCGCGAGAA ACTTTCGCTT TCTGACCGAA TTGCTAACAG GGTTCGTAAA
TCTAATTAA
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| Protein sequence | MFNKKDNAEE EISEVAFEDL EPTELSPVYH KPSNVRIIMD SCADFAPGIA EQLGVDIIQF
PYVGPDGEHY DDGWKSISAH EFFEGMRKDK KLRYTTSAIT PGHYFEVFEH AAKQGTPTVY
LCFTSALSSS FYAAEQAADM VREKYPDFEI YVVDNGAPSS AAQLLGLEAV HQANKGLSAK
EVAEWAKDAR NYIQGYFTLE TLDALAAGGR IPAAAANIGG KLDVKPELTY DSTGALTVKT
VCRGRKKALK SLIQDFRDSY SHDTSLPVGI ISADAQKDAN WLEAQIRKEK GCEGLTIIHS
QVGPVIGAHV GPGMVAIVFW GTDRREKLSL SDRIANRVRK SN
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