| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0974 |
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| Symbol | |
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| ID | 8413845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1099151 |
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| End bp | 1102018 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022562 |
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| Product | Phosphoenolpyruvate carboxylase |
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| Protein accession | YP_003179994 |
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| Protein GI | 257784777 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000578394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCA GTTCTCAAGA TTCAAATCTA GAGTCCAGCA ATGCTTCTTT TGACGAGAAA
CCCATCGATA GTGTAGCAAC TTCTGAGGTA GCTCAGTCGC TTCTTGAGCG ACGTGGAAAT
GAGATTGCTG CTGCTCGCAC CCTTATTCAG GCGCTTAAAG CACCAGCTCC ACTGCGTGAT
AACCTTACCT TCTTTTTACG CTTGGTAAGA AAAGTGCTTG CTGAGTACAA TCCAGATCTT
CTTACTAGTT TTGATACGTT GCTGGTTGAG GCAATTAAGG CTGGACCAGA TGATTTGTCT
ACAACTCGTG CGCCCTTGTT ACTTGAGGCA ATTAATGCTG TGCTCAAGGT AGATTCAGAG
AAGGAATCGC TTAACGCTTT CCTTCGTTTT GCCTCTACCA TCGATAGCTT GAGCATGGAA
GACTCCGTGC TTCTTATGCG TGCGTTTGTA ACTTTTTTCC ACTTGGCAAA TCTCTGTGAA
GAAAATTATC GCGTTACCAG CTTGCGTTCT CGTGAGGCTT CTGTTGATTC ATCTTCTGCA
GAAGATCCAA TCAACGAGAT AACTGTTGCA TATAGGCAGC TCATTGACGA GTGTGGTGAA
GAAGAGGCAA AGGCACGTCT TAATCGTCTT GAGTTCCATC CTGTTTTTAC TGCTCATCCA
ACTGAGGCTC GCCGTAAAAA TGTTGAACGT CGAATCCGCA TTATTTCAGA GCTTCTTGAT
GAACGCCAAA GACTTGGCGG TCCTGCTCGT GTGGAAAATG AGCGTCGCAT GCTGCAGGAA
ATTGACGGCC TGTTCCGTAC ATCTCCTATC GGTCATAAAA AGCCAACTCC TTTGGAGGAA
GCAGATACCG TCCTTAATAT CTTTGACACT ACTCTCTTTG AGATGGTTCC TTCGGTGTAT
CGTCGCTTTG ATAACTGGGC GCTGGGAGAA AACGCTGGTT GTGTACCACC TGTCTGTCCG
CCGTTCTTTC GCCCAGGCAG CTGGATTGGC TCCGATCGCG ATGGTAACCC TAACGTCACT
GCTTTAGTTT CTCGCCAAGT TGCCGAGAAG TACCGTGTAC ACGTACTACA AGCACTGGCT
GAAGCTACTA AGGAGGTCAG TCGAGGTCTG ACGCTTGATG GTATTTCAAC CCCAGCTTCA
CCCGCACTTG CTAATCTTTG GGCGCAGCAG GTAGAGATGA GCCAGGCTCT GACGTCTCGC
GCTGTTGATA AGGCTGGGTC TGAGTTGCAT CGTGCGGCTA TGCGCGTAAT TTCTGGTCGA
CTCAGCGCCA CCATTGAACG CAATGCTGAC CTTATGTATC AAAACGCCGA AGAGTTTATT
GCTGACCTGC GTGTTATTCA GGATTCGCTT GTTCAGGCAG GAGCTCGTCG TATTGCCTAC
GGTCCTATTC AGAGGCTTAT CTGGCAGGCT CAGACCTTTG GTTTTCACTT GGTAGAGATG
GAGTTCCGTC AGCACTCTTT GGTACACAAA CGTGCACTTG CTGATCTTGA GGCACATCCA
TCAACTGCCG AGAAACCCGC AAAGCTTGAT GCTATGACGC AGGAGGTGCT TGATACCTTC
CGATCTATTG GCTCAATCCA AAAGAAGAAC GGTATTAACG CTGCTCGTCG TTATATTATT
TCGTTTACAC AGTCTGCTCA GGATGTTGAG AATGTTTACA AACTGGCACG CCTTGCGTTT
GCAAATGAAG AAGATGTTCC CGTACTAGAC GTTATTCCGT TGTTTGAACA GATTGAAGAT
CTTGAGAACG CTGTTACCAC ACTTGATCAG GTAATTCAGA TTCCTGAGGT ACAGGAGCGT
CTTACTCAGA CAGACCGCAA GCTTGAGGTT ATGCTAGGCT ACTCAGATTC TTCAAAGGAT
GAAGGTCCAA CTACTGCAAC ACTGGTACTG CATAAAACTC AAGCCGCTTT GGCGGAGTGG
GCAGAGAAGA ACTCCATTGA TCTTATCCTG ATGCACGGCC GCGGTGGTGC TGTTGGTCGT
GGCGGTGGTC CTGCAAACCG CGCTGTTTTG TCTCAGCCTA AGGGATCTGT TAACGGCCGC
TTTAAACTTA CCGAGCAAGG AGAGGTTATC TTTGCTCGTT ATGGAGACCC AACGCTTGCT
CGCCGTCACG TAGAGTCTGT TGCAGGAGCA ACGCTGCTTC AGATGGCACC TTCTCTTGAG
CAGAAGAATA CTCATGCAGA TGTGAAGTTT GCTTCATTAG CTTCTGAGCT TGATAAGGCT
TCCAAACAGC GCTTCTTAGA ACTCATTCAC TCTGATGGTT TTGCCGAGTG GTTCTCGGTT
GTTACCCCTC TGACTGAGAT TGGTCTTCTC CCTATTGGTT CAAGACCTGC AAAACGTGGT
CTTGGTGCAA AGTCTCTTGA TGATTTACGC GCAATCCCAT GGATTTTCTC GTGGTCACAG
GCTCGTATCA ACCTAGCTGC TTGGTACGGA TTGGGTAGTG CATGTGAGGC TGTGGGAGAT
ATTGAGCGTC TTCGTGAGGC ATACAAGGAG TGGCCGCTGT TCACTACGTT TATTGACAAC
ATCGAGATGT CAATCTCGAA GGTTGATGCT CGTATCGCAA GACTTTACCT GGCTTTGGGA
GATCGCCCTG AGCTTTCAGA GATGGTTCTT TCTGAGATGT CGTTGACACG TAAGTGGGTC
CTTGCTATTA CCGGTAACAA GTGGCCTCTG GAGAACCGTC GCGTGCTAGG ACCTGTTATT
CGTCTGCGTC TACCATTTGT TAACATTCTC TCGGTTACGC AGGTACATGC CCTTTCTGAG
CTTCGTACAA GGGACGACAT GCTTACTCCA GAGGAGCGTG CAAATATCAC GTATCTGATT
TTGTGCACTG TGTCTGGTGT TGCTGCGGGT CTGCAGAATA CGGGCTGA
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| Protein sequence | MAGSSQDSNL ESSNASFDEK PIDSVATSEV AQSLLERRGN EIAAARTLIQ ALKAPAPLRD
NLTFFLRLVR KVLAEYNPDL LTSFDTLLVE AIKAGPDDLS TTRAPLLLEA INAVLKVDSE
KESLNAFLRF ASTIDSLSME DSVLLMRAFV TFFHLANLCE ENYRVTSLRS REASVDSSSA
EDPINEITVA YRQLIDECGE EEAKARLNRL EFHPVFTAHP TEARRKNVER RIRIISELLD
ERQRLGGPAR VENERRMLQE IDGLFRTSPI GHKKPTPLEE ADTVLNIFDT TLFEMVPSVY
RRFDNWALGE NAGCVPPVCP PFFRPGSWIG SDRDGNPNVT ALVSRQVAEK YRVHVLQALA
EATKEVSRGL TLDGISTPAS PALANLWAQQ VEMSQALTSR AVDKAGSELH RAAMRVISGR
LSATIERNAD LMYQNAEEFI ADLRVIQDSL VQAGARRIAY GPIQRLIWQA QTFGFHLVEM
EFRQHSLVHK RALADLEAHP STAEKPAKLD AMTQEVLDTF RSIGSIQKKN GINAARRYII
SFTQSAQDVE NVYKLARLAF ANEEDVPVLD VIPLFEQIED LENAVTTLDQ VIQIPEVQER
LTQTDRKLEV MLGYSDSSKD EGPTTATLVL HKTQAALAEW AEKNSIDLIL MHGRGGAVGR
GGGPANRAVL SQPKGSVNGR FKLTEQGEVI FARYGDPTLA RRHVESVAGA TLLQMAPSLE
QKNTHADVKF ASLASELDKA SKQRFLELIH SDGFAEWFSV VTPLTEIGLL PIGSRPAKRG
LGAKSLDDLR AIPWIFSWSQ ARINLAAWYG LGSACEAVGD IERLREAYKE WPLFTTFIDN
IEMSISKVDA RIARLYLALG DRPELSEMVL SEMSLTRKWV LAITGNKWPL ENRRVLGPVI
RLRLPFVNIL SVTQVHALSE LRTRDDMLTP EERANITYLI LCTVSGVAAG LQNTG
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