| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0966 |
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| Symbol | |
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| ID | 8413837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1090178 |
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| End bp | 1092346 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022554 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_003179986 |
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| Protein GI | 257784769 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000592542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCA CAATTACAAA TGAAATCTCA GGTCGCATTC GTGCAAAATG CGACTTGGGT
CATATCGACG AGGCTGAGGC TCGCGGTATT TCCTATGAGC TGATGCGCGT TGACGGTGTT
CGTCATGCAG AAGTTCACAT GGCAAACGGC TCTCTACTGC TGAGGTTTGA TCCTCTTAAG
AGAGACCAGG TACTTGCCGC TGTTAGTGCT TTTGATGTCT TGAACTTGCC ACGAGAAGAA
GAGGCAGGTC TTGAAGACTT CTGCAGCTCA ATTGAGATGG CTCTTGAGAA TAATCGCTTC
CAGATGGAGG TTGTGACTAC ATTCGCTCGT CGCTGGATTA TGCGTTCTTT GCCACTGCCT
GCAGTTGCTA ACTACGCCTA CGTTATTCTC CGCGCCATTC CATTTGTTGT AGAAGGCGTT
AAGCGTCTGT TTAAGAAAGA GCTAACAGTT GAGGTTTTGG ACGCAACTGC TATCACTACT
TCCATTCTTA GAAATGAATG GGCAGATGCA TCTACTGTCA TGTTTTTGCT TGAGCTTTCT
GCAACTATGG AGAATCACGT TGCCAGCCGA GCTCGTCTTG CACTCCGTGA CGGCCTGATT
ACTCGTTCTG AGAACGTTTG GGCTCGTATT GATGGCAAGG ACGTTATGAT TGCTCTTTCT
GAGGTTGAGA AGGGCATGGT TTTGCATCAG CGTGCTGGCG GCGTTCTTCC TGTTGACGGC
AAAGTTGTCG AAGGTATCGG CCAGATGAAC GAAGCTGCCA TGACAGGTGA GTCTCGCCTT
GTTACCAAGG AGCCTGGCTC AACCGTTTAC GCTGGCACTG CACTTGAAGA CGGTGACCTT
ATGGTAAGCG TTACCGCTCC TCCAGGTACG TCTCGTATTG ACAACATCGT TGATATGGTT
GAGCAGTCTG CCGAGCTCAA GGCTGGTGCA CAGTCAAAAG CTGAACGCCT TTCCGATGCA
CTGGTTCCTT ACAGCTTCCT TGCTTTCTTT GGCATTTGGG GTGTTACCCA AAACATCACT
AAGGCCTTGA CCGTTCTTAT GGTTGATTAT TCCTGTGCTA TTAAGCTTTC CACTCCTGTT
GCAGTGGGTA GTGCTATGGA TGAGGCAGCT AAGTTTGGCA TGACTGTTAA GGGTGGCAAG
TATCTTGAGA AGATCGCTGC AGCAGATCTT ATCGTCTTTG ATAAGACGGG TACGCTGACC
AAGGCAGTCC CACATGTTGA GTGTATTGTC AGCTTCTGTG ATCGCACCGA AGACCAACTT
TTGCGTCTTG CTGCATGTAT TGAGGAACAC TTTCCACACA GCATGGCCCG CGCAATTGTG
AATGAGGCAA AGGTACGTGG TCTCAAGCAC AAGGACGAGT TCCATGCAGA GGTTAAATAT
GTTGTTGCTC ATGGTATTCG TACCAAGGTT AACAACAAAG AGGTTTGCAT TGGTTCTGCT
CACTTCATTT TTGATGACGA GAAGACTCCA ATGCCTGAGG GAATTCTAGA TGACCTCGCG
CAGATTGCTC CAACCTCGTC TATTATCTTC ATATCCGAAG ATTCAAAGCT TATTGCTGCA
ATTTGTATTA CCGATCCTGT AAGAGAAGAT GCAGCTGCAA CTATTACGCA GCTCCGCGCT
CTTGGCGTTA AGCGTATGGT TATGTTGACT GGTGACTCAG AAAACGTTGC AGCAAGTGTC
GCCAGGAAGC TTGGTCTTGA TGACTATGTA GCACAGATTC TTCCAGAAGA TAAGTGTGCA
TATGTTAAGA AGTTCCAGCA GGAGGGCTAC ACCGTTGCAA TGGTAGGTGA CGGAATTAAT
GATTCACCTG CTCTAGCTGT TTCTGATGTT TCATTGGCAC TTTCTGATGC AACTGATATT
GCTCGTGCTG TTGCTGATAT TTCAATTAGA AATGATTCGC TTGAATCGCT GGTAATCATG
CGTCTTTTGG GCCAGCAGGT AATGAAGAGA ATTCATGCTG ACTATCGTAC GATTGTTGCT
CTAAATAGTT CTTTCATCGC CGCAGGTGTT GCAGGTCTTA TTACCGTAAG TACTGCTGCG
TATATGCACA ATCTTCTAAC ACTTATGGTA ACGCTTGCAA ACACAAGATC GTTGCTTACC
ACTGCAGCTC ATAATCCATA TGTTCCTTCA GAGGTAAAAA TGCTCTTGGC TGAGGAACAG
ACTGCTTAG
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| Protein sequence | MRFTITNEIS GRIRAKCDLG HIDEAEARGI SYELMRVDGV RHAEVHMANG SLLLRFDPLK
RDQVLAAVSA FDVLNLPREE EAGLEDFCSS IEMALENNRF QMEVVTTFAR RWIMRSLPLP
AVANYAYVIL RAIPFVVEGV KRLFKKELTV EVLDATAITT SILRNEWADA STVMFLLELS
ATMENHVASR ARLALRDGLI TRSENVWARI DGKDVMIALS EVEKGMVLHQ RAGGVLPVDG
KVVEGIGQMN EAAMTGESRL VTKEPGSTVY AGTALEDGDL MVSVTAPPGT SRIDNIVDMV
EQSAELKAGA QSKAERLSDA LVPYSFLAFF GIWGVTQNIT KALTVLMVDY SCAIKLSTPV
AVGSAMDEAA KFGMTVKGGK YLEKIAAADL IVFDKTGTLT KAVPHVECIV SFCDRTEDQL
LRLAACIEEH FPHSMARAIV NEAKVRGLKH KDEFHAEVKY VVAHGIRTKV NNKEVCIGSA
HFIFDDEKTP MPEGILDDLA QIAPTSSIIF ISEDSKLIAA ICITDPVRED AAATITQLRA
LGVKRMVMLT GDSENVAASV ARKLGLDDYV AQILPEDKCA YVKKFQQEGY TVAMVGDGIN
DSPALAVSDV SLALSDATDI ARAVADISIR NDSLESLVIM RLLGQQVMKR IHADYRTIVA
LNSSFIAAGV AGLITVSTAA YMHNLLTLMV TLANTRSLLT TAAHNPYVPS EVKMLLAEEQ
TA
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