| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0957 |
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| Symbol | |
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| ID | 8413828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1077935 |
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| End bp | 1079101 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022545 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003179977 |
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| Protein GI | 257784760 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.750532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA ATACAGATGT TCTTGCACAA GAGAATAATC ATGCAACTGA GACTGTAGAT
ACAGCATTCG AGCACGTTAT TGAAGGTCCA AATGGACAAT CAGTACAATT TTGCAGCCTT
GAGGAGCGTC GTCTTGCACA AGAGACCGCC CAAAAGGAGC GAGAAGAGCA GTGTAAGAAG
AATGTTCTTC TTGACGTTAA TCATCTTGAT GTTACGCTCT TCACTGAAGA TGGCGCGCTT
CCTGCAGTAA GTGACCTCTC GTTTATTATG CGAAAAGGCG AGACTCTTGC GGTAGTGGGA
GAGTCTGGCT GTGGTAAGTC TATGACAGCT TTATCTGTCA TGGGATTGCT TCCCACGCCT
CCTGCGCAAA TTACCGGCGG AGAAATTATT TTTGAGGGAA CTGATTTAAC TCAACTTCCT
CGTGGCGGTA TGCGTGACTT CCGTGGTAAT CGCATTGGTA TGATTTTCCA AGAGCCTATG
ACCTCTTTGA ACCCTGTTAT GAAATCTGGT CTTCAGATTC GTGAGGGTAT CCTTGTTCAT
AATCCAAGTA TGAGCAAAGA AAAAGCAGAT CAAAAGGCCC TTGATATGAT CAAACTGGTG
GGTATTCCTG CACCAGAGAA GGTTTTCTCG TCATATCCAC ATGAGCTTTC TGGTGGTATG
CGTCAGCGTG TCATGATTGC TATGGCACTT GCTTGTCAGC CATCGCTTCT TATCTGTGAC
GAACCTACCA CCGCTTTGGA TGTAACAGTT CAAGCTCAGA TTTTGCAGAT TATTGACCGC
ATGAAGCAAG ATTTGGGAAC TGCCATTATG CTGATTACGC ACGACATGGG TGTTGTTTCC
GAGATGGCTG ACTGGGTTCT TGTCATGTAC GCTGGTCATC GCGTTGAGTA TGCACAGTCT
GCAGAGCTCT TTACTAACCC TCTGCATCCA TATGCTCAGG GCTTAATTGC ATCCATTCCC
TCGTTTGATG AGCATACTAA AAAACTCTAT GCAATTCCTG GTAGCGTCCC TATGCTTTCT
CATATGCCTT CTGGTTGCCC GTTCCATCCA CGTTGTCCGT TTGCTAAGGA CATTTGTAAG
AATCGTCGTC CTGGCATGAC TGCTGTTGGC GAAGACAATT GCCATACTGT CAGCTGTTGG
AAATACACTG ATGAGTGGGG TGAGTAG
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| Protein sequence | MAENTDVLAQ ENNHATETVD TAFEHVIEGP NGQSVQFCSL EERRLAQETA QKEREEQCKK
NVLLDVNHLD VTLFTEDGAL PAVSDLSFIM RKGETLAVVG ESGCGKSMTA LSVMGLLPTP
PAQITGGEII FEGTDLTQLP RGGMRDFRGN RIGMIFQEPM TSLNPVMKSG LQIREGILVH
NPSMSKEKAD QKALDMIKLV GIPAPEKVFS SYPHELSGGM RQRVMIAMAL ACQPSLLICD
EPTTALDVTV QAQILQIIDR MKQDLGTAIM LITHDMGVVS EMADWVLVMY AGHRVEYAQS
AELFTNPLHP YAQGLIASIP SFDEHTKKLY AIPGSVPMLS HMPSGCPFHP RCPFAKDICK
NRRPGMTAVG EDNCHTVSCW KYTDEWGE
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