Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0956 |
Symbol | |
ID | 8413827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1076820 |
End bp | 1077932 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645022544 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003179976 |
Protein GI | 257784759 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0709031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAG AGAAGAACAC AGACATAAAG GACCTTTCTG GCGAGAAAAC CATCTTGTCT GTAAAGAACC TTGTTAAACG TTTCCCCATT AAAAATGGTG TTTTTGGTCG TTCTAACGCT TCAGTTTATG CTGTTGAGGA TGTTTCGTTT GACCTTAGAC GTAAAGAGAC CCTGGCTATT GTTGGCGAGT CTGGTTGCGG AAAGTCTACA ACAGGTAAGT GCGTGCTACG CTTAACCGAG CCAACCTCCG GTACGGTTGA GCTTGACGGG GAAGACTTTA CCTCACTTAA GGGGGAAGAT CTTAAGCGTG CTCGTCAGAA GATGAAACTT ATCTTCCAAG ATCCTTATAG CTCTTTGAAT CCTCGTATGA CTGTCATGGA TATCATTGGC GAGCCTATTG ATATTGCGGG CACATATAAG ACAAAAGCAG AGCGTGATGC CCGCATTGAA GAGGTTATGG AAGAAGTTGG CCTTAACCTT GAGTTTAAGT ACCGCTATCC TCATGAGTTC TCAGGCGGTC AGCGCCAGCG TATTGGTATT GCTCGTGCTA TTGTGCTTGA ACCAGAGATT GTTGTTTGCG ATGAGCCTGT TTCTGCTTTG GATGTTTCTG TCCAAGCAAA GGTAATTAAT TTGCTTGAGG AACTGCAGAA AGAGCATGGC TTGGCATATA TCTTTATCAG CCACGATCTC TCTGTTGTTC GTCACATTGC AGATACTGTT ATGGTCATGT ACCTGGGCCA TCAGATGGAG TTTGCTAGCA AGGATGCGCT ATTTGAGCAT CCTCTGCACC CATATACTCA GGCACTCTTG GATGTTATTC CTCGTATCCG TCATGAGCGT ATTCAGGAGA AGCGCATCCT CCAAGGTGAT GTTCCAAGTC CTGCAAACCC ACCTTTAGGC TGCGTGTTCC ATACTCGCTG CCCTAAGGCA ATGAAGGTTT GCTCTGAGCG CATTCCTGAA CGTGTCGAGG TTGAGTCTGG TCATTTCTGC TCCTGCCACC TGTACGACAC ATCGCTCTCT GATACTGATC GTACACCACA GGTTGCACAT GCTATTGAGG CTGCCCAGAA GGCCGTAGAA GAAGCGCGGC TTGAGGAGAA GATATCTGAG TAG
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Protein sequence | MAEEKNTDIK DLSGEKTILS VKNLVKRFPI KNGVFGRSNA SVYAVEDVSF DLRRKETLAI VGESGCGKST TGKCVLRLTE PTSGTVELDG EDFTSLKGED LKRARQKMKL IFQDPYSSLN PRMTVMDIIG EPIDIAGTYK TKAERDARIE EVMEEVGLNL EFKYRYPHEF SGGQRQRIGI ARAIVLEPEI VVCDEPVSAL DVSVQAKVIN LLEELQKEHG LAYIFISHDL SVVRHIADTV MVMYLGHQME FASKDALFEH PLHPYTQALL DVIPRIRHER IQEKRILQGD VPSPANPPLG CVFHTRCPKA MKVCSERIPE RVEVESGHFC SCHLYDTSLS DTDRTPQVAH AIEAAQKAVE EARLEEKISE
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