| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0956 |
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| Symbol | |
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| ID | 8413827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1076820 |
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| End bp | 1077932 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022544 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003179976 |
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| Protein GI | 257784759 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0709031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAG AGAAGAACAC AGACATAAAG GACCTTTCTG GCGAGAAAAC CATCTTGTCT
GTAAAGAACC TTGTTAAACG TTTCCCCATT AAAAATGGTG TTTTTGGTCG TTCTAACGCT
TCAGTTTATG CTGTTGAGGA TGTTTCGTTT GACCTTAGAC GTAAAGAGAC CCTGGCTATT
GTTGGCGAGT CTGGTTGCGG AAAGTCTACA ACAGGTAAGT GCGTGCTACG CTTAACCGAG
CCAACCTCCG GTACGGTTGA GCTTGACGGG GAAGACTTTA CCTCACTTAA GGGGGAAGAT
CTTAAGCGTG CTCGTCAGAA GATGAAACTT ATCTTCCAAG ATCCTTATAG CTCTTTGAAT
CCTCGTATGA CTGTCATGGA TATCATTGGC GAGCCTATTG ATATTGCGGG CACATATAAG
ACAAAAGCAG AGCGTGATGC CCGCATTGAA GAGGTTATGG AAGAAGTTGG CCTTAACCTT
GAGTTTAAGT ACCGCTATCC TCATGAGTTC TCAGGCGGTC AGCGCCAGCG TATTGGTATT
GCTCGTGCTA TTGTGCTTGA ACCAGAGATT GTTGTTTGCG ATGAGCCTGT TTCTGCTTTG
GATGTTTCTG TCCAAGCAAA GGTAATTAAT TTGCTTGAGG AACTGCAGAA AGAGCATGGC
TTGGCATATA TCTTTATCAG CCACGATCTC TCTGTTGTTC GTCACATTGC AGATACTGTT
ATGGTCATGT ACCTGGGCCA TCAGATGGAG TTTGCTAGCA AGGATGCGCT ATTTGAGCAT
CCTCTGCACC CATATACTCA GGCACTCTTG GATGTTATTC CTCGTATCCG TCATGAGCGT
ATTCAGGAGA AGCGCATCCT CCAAGGTGAT GTTCCAAGTC CTGCAAACCC ACCTTTAGGC
TGCGTGTTCC ATACTCGCTG CCCTAAGGCA ATGAAGGTTT GCTCTGAGCG CATTCCTGAA
CGTGTCGAGG TTGAGTCTGG TCATTTCTGC TCCTGCCACC TGTACGACAC ATCGCTCTCT
GATACTGATC GTACACCACA GGTTGCACAT GCTATTGAGG CTGCCCAGAA GGCCGTAGAA
GAAGCGCGGC TTGAGGAGAA GATATCTGAG TAG
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| Protein sequence | MAEEKNTDIK DLSGEKTILS VKNLVKRFPI KNGVFGRSNA SVYAVEDVSF DLRRKETLAI
VGESGCGKST TGKCVLRLTE PTSGTVELDG EDFTSLKGED LKRARQKMKL IFQDPYSSLN
PRMTVMDIIG EPIDIAGTYK TKAERDARIE EVMEEVGLNL EFKYRYPHEF SGGQRQRIGI
ARAIVLEPEI VVCDEPVSAL DVSVQAKVIN LLEELQKEHG LAYIFISHDL SVVRHIADTV
MVMYLGHQME FASKDALFEH PLHPYTQALL DVIPRIRHER IQEKRILQGD VPSPANPPLG
CVFHTRCPKA MKVCSERIPE RVEVESGHFC SCHLYDTSLS DTDRTPQVAH AIEAAQKAVE
EARLEEKISE
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