| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0955 |
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| Symbol | |
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| ID | 8413826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1075121 |
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| End bp | 1076725 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022543 |
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| Product | 4-phytase |
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| Protein accession | YP_003179975 |
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| Protein GI | 257784758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00228685 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC ACGTATTTAA TAATCTTTCC CGTAAATCAT TTTTACGTGG ATCTTTGGCG
GCTGCCGTTG CCGCCGGTTC TGCTTCACTA CTTTCTGCTT GTGGTGGATC TGCTAGCGGA
GATGGTGAAA AAAAGGTATT ACGCTTTGGC GTAAACAATC CAAAAGTTAC CTTTGATACT
CAAAAAACCT CTGGCTCTGT TGGTGTATCT GAAGCAGTTG CAGAATCTTT ACTGGTGCTT
AACCCAGACA CAAAAGAGAT TGAGCCAAAT CTGGTAACTG GTCTTCCTAC TGTTTCTGAT
GATGGTCTTA CTTACTCATT TGAGCTTAAA GATGGCGTCA AATTCCACAA CGGAGAAACC
CTTAAATCAT CTGACGTTAA GTACACCTTA ACGCGCATGT TCTTGCCTGC TACCAAGGCA
ACCTCAATTG ACTCTTATGC TTACATTGAG GGTGCTAAAG ACATTATTGC TGGTAAAACT
GAAGAGCTTT CTGGCGTTGT TATTAAAGAC GACCGTCACT TTGACATTAA GCTAACCCAA
CCGTATTCAA CCTTCAATGC AATCATGGCT CAATTCTATG CTGTCATCTA CCCAGAGAAG
GCCTGCAAAG AAGCTGGTGA AGCGTGGGGT ACTGAGACCA ATTTCATTGG CACTGGTGCA
TACAAGCTTG TCTCAAACGA TAGCGCTACA GAAGTTGTTC TTGAGGGATT TGCTGACTAC
CATGAAGGTA AACCTGGCCT GGATGAGCTT AGATTTGTTT ACATTGACGA CGCTAACACC
CGTGTTCTTA ACTACAAGAA CAACGATGTT GACCTGGTCT TTATTTCTCA GTCTCTTATT
CAGCAGTATC AAAACGATGA ATCTATCTCC AAAGAAATTG TCAATTACAC ACCTGCATCC
ACGCAGTTTG TAAACTTGAA TCTTCAGAGT CAGAACCTCA AAGATGTTCG TGTTCGTCAG
GCGCTCTCAA TGGCAATTGA TAGAGACACC ATTTGTAGCA CCATTCTTTC TAATGTTGCT
AAACCTGCAA AGTCATTTAT TCCATCTTCT GAGACTGGTT ACAATGAGTC CGCTCCAGAG
TTTGAGTACA ACGTAGACAA AGCAAAACAG CTTCTTGCAC AAGCAGGTGT TTCTAACCTT
ACTCTTAACG CACAGGTTAG AAGCCAAGAC CAGAACCTTA TGGTTGCTAT ACAGGATGCA
TGGTCCAAGA TTGGCGTTAC TTGTAACGTA AGCGTTATTG ACTCTGGTGT TTGGAGCGAC
GCACGCGCCA ACGGAGAGCT TGAGGTTACC TTGGTTACCT GGTCTACCCT CTCCTTCCAA
GGCATTGAGC ACATGGGCTC CTACTTCCGC TCTGACCGCG CTGCAAAGAA GTCTTCCTTC
TACAACAGTT CCGAGTTTGA CAACCTTGTT GACCAAGCTC GCCTCACAGT CAATGACAAT
GACAAAGTTC TTGAGCTTAC CCGTCAGGCA GATAGTCTCA TGACACACAC AGACTACGCT
TGCCTGCCTA TTGACTGGCC ACAGATGCCC TACGTCCTAA AGCCAGAATT TACGGGCCTC
AGCGTTCTGG TCAATCCTCA CTTTGATAAG GTTAAGAAGA AGTAA
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| Protein sequence | MKEHVFNNLS RKSFLRGSLA AAVAAGSASL LSACGGSASG DGEKKVLRFG VNNPKVTFDT
QKTSGSVGVS EAVAESLLVL NPDTKEIEPN LVTGLPTVSD DGLTYSFELK DGVKFHNGET
LKSSDVKYTL TRMFLPATKA TSIDSYAYIE GAKDIIAGKT EELSGVVIKD DRHFDIKLTQ
PYSTFNAIMA QFYAVIYPEK ACKEAGEAWG TETNFIGTGA YKLVSNDSAT EVVLEGFADY
HEGKPGLDEL RFVYIDDANT RVLNYKNNDV DLVFISQSLI QQYQNDESIS KEIVNYTPAS
TQFVNLNLQS QNLKDVRVRQ ALSMAIDRDT ICSTILSNVA KPAKSFIPSS ETGYNESAPE
FEYNVDKAKQ LLAQAGVSNL TLNAQVRSQD QNLMVAIQDA WSKIGVTCNV SVIDSGVWSD
ARANGELEVT LVTWSTLSFQ GIEHMGSYFR SDRAAKKSSF YNSSEFDNLV DQARLTVNDN
DKVLELTRQA DSLMTHTDYA CLPIDWPQMP YVLKPEFTGL SVLVNPHFDK VKKK
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