| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0951 |
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| Symbol | |
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| ID | 8413822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1070558 |
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| End bp | 1071574 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022539 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_003179971 |
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| Protein GI | 257784754 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00952521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAC GTTCGTTCCT TAAGCTTGCA AGTCTTATTC CAGCTACAGC ATTGTTTGGC
TGCAAGGGAA CAAGTCAAGA GAAGTCTCAA GAAACTGCAA AAGATGAGGC TAAGAAATCT
GACCCCGTTG CGGTAAAAGT TGCAACACTT AAAGGACCTA CCGCCATGGG CTTGGTTAAG
TTCATGAGTG AGGTTGAAGC AAAAAACATT ACCGACAACA ATTATTCATT TGAGATTTTA
GATGCCCCTG ATCAGGTAGT TGCTAAGGTA GCTCAGGGTG ATGTCGACGT TGCGTCTATT
CCTGCAAACC TTGCCGCTAC GTTATTCAAC AAGACCAAAG GTGCCTACAA GGTAGCTTGC
CTCAACGTAC TGAATGTTCT CTACATTGTT GAGACGGGAA GCGCTATTTC TAAGATTGCT
GACCTTAAGG GAAAGACGCT CTATGCCTCT GGTAAGGGTG CTGTTCCAGA GTACACACTG
TCCTACTTGT TGAGCAAAAA TGGTATGACG CTTGGTGAAG ATGTCCAGGT TGAGTGGAAG
AGCGAGCATA CCGAGTGCGT TGCAGCTCTA GCACAAGATC CAGAGGGAAT CGCATTGCTT
CCACAGCCTT TTGTTACCGT GGCACAAACC AAGAACAGTC AGATTCGCAT AGCAATTGAC
CTTGGTGCCG AGTGGGAGAC AGTTAATCCT CAGAGTAAGT TGATTGCAGG CGTAACCATT
ATTTCTTCAA AGCTTATCTC GGATTCTCCA GATGCTGTGA CTGCTCTGCT TTCTCACTAC
AAAGACTCTG TTGAATTTGC TGTTGATCAT CCAGATGATG CTGCTACACT TGTGGGCAAA
TACGGCATTG TTCCAGAGCC TATTGCCAAG GTTGCACTGC CTAAGTGTAA TATTACGTAT
ATTGATGGCG CAGATATGAA GACTGCACTT TCAAGTTATT TAGGCATTCT GGCCGAGGCT
AATCCTCAGT CAGTAGGCGG ACAGGTTCCC GGAGACGATT TCTACTTTGG CGCATAA
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| Protein sequence | MDRRSFLKLA SLIPATALFG CKGTSQEKSQ ETAKDEAKKS DPVAVKVATL KGPTAMGLVK
FMSEVEAKNI TDNNYSFEIL DAPDQVVAKV AQGDVDVASI PANLAATLFN KTKGAYKVAC
LNVLNVLYIV ETGSAISKIA DLKGKTLYAS GKGAVPEYTL SYLLSKNGMT LGEDVQVEWK
SEHTECVAAL AQDPEGIALL PQPFVTVAQT KNSQIRIAID LGAEWETVNP QSKLIAGVTI
ISSKLISDSP DAVTALLSHY KDSVEFAVDH PDDAATLVGK YGIVPEPIAK VALPKCNITY
IDGADMKTAL SSYLGILAEA NPQSVGGQVP GDDFYFGA
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