| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0942 |
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| Symbol | |
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| ID | 8413813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1059513 |
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| End bp | 1059974 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645022530 |
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| Product | hypothetical protein |
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| Protein accession | YP_003179962 |
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| Protein GI | 257784745 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2731] Beta-galactosidase, beta subunit |
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| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTTCT CGTCAATTAA AAATTTATCT GAGAATGACT TTGGTCAGAA ATATATGGCT
TGTGCTACAG AGTTTTTATC AACTCACAAT TTGGATGAGT TGCCTTTAGG TAAAACAGAA
ATTGATGGAG ATAACGTTTT TGTGAACGTC ATGGAGATAG AGTCAGTTCA GCCTAGCGAG
AAAGACTATG AGGCTCATAA GATTTACGCT GATATTCACA TAGTTATTTC TGGCACCGAA
AGTATCGCAG TTGCCCCTCT TGAGCAGTGT GTTCTTAAAG GTAAATTTGA TTATGACACT
GATTTTGGTG CTTATACCAA TCCTGGGAAA GAGACTTGGG TTACTCTGCA CGCAGGTGAT
TTTATGGTAA CGCCTCCATC TGATGCTCAT AAACCAGGTT GTACGTTGGA GAAATCTGAC
TCTAAGCTCA AGAAAGCTGT GATGAAGGTT CGCGTTAAAT AA
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| Protein sequence | MIFSSIKNLS ENDFGQKYMA CATEFLSTHN LDELPLGKTE IDGDNVFVNV MEIESVQPSE
KDYEAHKIYA DIHIVISGTE SIAVAPLEQC VLKGKFDYDT DFGAYTNPGK ETWVTLHAGD
FMVTPPSDAH KPGCTLEKSD SKLKKAVMKV RVK
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