Gene Apar_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0940 
Symbol 
ID8413811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1055951 
End bp1056460 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID645022528 
ProductybaK/ebsC protein 
Protein accessionYP_003179960 
Protein GI257784743 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAA AAACGGCAAA GATCCAAAAA ACAAATGCAA TGAGGGAGCT TGATGCTGCC 
AATATTGCTT ACGAGTTCCA ATCGTATGAG GTAGACAAAA ATGTTCCTTC TGGTGAGTTG
GGAACTCATA TTGCAGAGAT GCTTGGAGAA GATCCAGACG CTGCATTTAA AACACTTGTC
TGCGTATCTT CAAGCGGAGA GCATGTGGTG TGCTGCATTC CTGTGGATCA AGAGCTTGAT
CTTAAGAAAG CAGCAGCAGC CTCGGGACAA AAGAACCTTT CCATGCTGCC CGTTAAAGAG
CTTGAGGGTT TAACAGGCTA TGTTCGCGGC GGTTGCACTC CTGTTGGTAT GAAGAAGCAG
TTTCCCACTA TAATTGACGA GACTGCTCAG CTTTTTGAGC TCATTCATAT TTCTGGTGGA
AAACGTGGAC TCAGTTTGAC GCTTTCTCCA GAGGATTTAG CTTCATTTGT ATCGGCTACG
TTTGCAGATA TTGTTCGCGA GGTGCACTAG
 
Protein sequence
MARKTAKIQK TNAMRELDAA NIAYEFQSYE VDKNVPSGEL GTHIAEMLGE DPDAAFKTLV 
CVSSSGEHVV CCIPVDQELD LKKAAAASGQ KNLSMLPVKE LEGLTGYVRG GCTPVGMKKQ
FPTIIDETAQ LFELIHISGG KRGLSLTLSP EDLASFVSAT FADIVREVH