| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0939 |
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| Symbol | |
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| ID | 8413810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1054317 |
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| End bp | 1055951 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022527 |
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| Product | virulence factor MVIN family protein |
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| Protein accession | YP_003179959 |
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| Protein GI | 257784742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCATATC AGCCCAAACA TATGCGACTT CCAGCAGAGT CTCCTGATAA AGAGGATGCT
TCTAAGCAGA AGGACTTAAG CCGCTCTACC TCCATGATGA GTGTGCTTGT CCTGATTAGT
CGTATTACGG GTTTCTTAAG AACTTGGGCT CAAGCATTTG CTATGGGCGC AACCGTTCTT
GCAAGCTGTT ACTCCATTGC AAACACCCTT CCTGACCAGC TCTATGAGCT TGTTGGTGCA
GGTATGCTTA CCACAGCATT TTTGCCGGTA TATCTATCTA TTAAAAAGAA AGTTGGACAA
GACGAGGCAA ACGCTTATAC CTCCAACTTA CTTTCAATTG TTGTTGTTGC AACAGGACTT
GTTGCTGTCT TAGGCTTCTT CTTTGCCGCA GAAGTGGTGT ATACACAGTC CTTCTCGGCA
GGAACTGATT TTGATCCTAC GCTGGCGGTG TACTTTTTCA GGTTCTTCGT CATAGAGGTT
ATGCTGTACT GCTTCTCCAC CATTTTCTCT GGTGTTTTGA ATGCAGAGCG AGACTACCTC
TGGCCAGCCG CAGCTCCTAT TTTTAATAAC TTTGTGACTA CAGCATCGTT CTTTGCGTAT
GCATTCTTGG TTAACACTAA CCCTGAGCTG GGTCTTTTGA TTCTTGCATT GGGAAATCCG
CTGGGTGTAT TGATTCAGGT TCTGATTCAG GTTCCGTCAC TTAAGCGCAA GGGGATTAAG
CTCTCGTGGA GAATTAATCT TAAAGATCTT GCACTCAAAG AGACGCTCAA GATTGGTGCA
CCTGCTCTGA TTGTTGTGGT TGCTACTTTT GTGACTATGT CAGTTCAGAC AAGCTCTCAG
CTTAGTGTTT CTGCATCTGG TGCATCTATT GCGGCATACG CTCGTCTTTG GTATACGCTG
CCATATTCCA TTTTGACAGT ACCTATTACC ACAGCACTCT TTACCGAGCT GTCTGATAGC
TGGGCAAAAG AGAATATGGA TCAGTTTAAA AAGGACCTCA AGCATGGTAT CAATCAAATT
CTATTCTTTA CCGTGCCGTT TATGATGTAC TTGATGATTT TCTCGATGCC GCTTGTTTCT
ATTATTGGAG CAAGTAAGTT TACAGAAGAT CAGATGCTGT TAACTCAGCA GTTTTTGATT
GGTCAGTCTC TTGCTTTGCC TTTGTATGGT ATTGGCATGT ACCTTCAAAA AGTCTGCTCA
GCCATGCGAC GCATGACACT CTATGCTGTC TCGGCAACAC TGGGATCTGT TGTGCAGGTC
TTGGTACTGC TAGTGGGTAC TTCTCATTTT GGCATGATGT TTGTAGCAAC TACCTCTGCT
ATCTTCTATG TAGTCATTGA CACCATTATG TTGATTAGCC TGCGTAAGCA TCTTGGCCAG
ATTGGACTGA AGTCCATGGT GTTTGCTTTT GCTCGCTCAA TTCTTTTTGG TCTAGCAGGA
TCTGCGACGG CGCTTCTGAT TATGGTAGGT TTGCGTGCTG TCATTGGTGT TCCAGATGGA
CGAGCGCTCT ATGGCGTGCT GTATTGCATC TTTGCAGGTA TTCCAGCTGT CTTGGTTACC
TATGGCTTGG CAATCCTCTT CAAATCACCA GAGTCTGCTA TGCTTCGCTC ACTGGTATCT
CGCGTAAGGT CATAG
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| Protein sequence | MAYQPKHMRL PAESPDKEDA SKQKDLSRST SMMSVLVLIS RITGFLRTWA QAFAMGATVL
ASCYSIANTL PDQLYELVGA GMLTTAFLPV YLSIKKKVGQ DEANAYTSNL LSIVVVATGL
VAVLGFFFAA EVVYTQSFSA GTDFDPTLAV YFFRFFVIEV MLYCFSTIFS GVLNAERDYL
WPAAAPIFNN FVTTASFFAY AFLVNTNPEL GLLILALGNP LGVLIQVLIQ VPSLKRKGIK
LSWRINLKDL ALKETLKIGA PALIVVVATF VTMSVQTSSQ LSVSASGASI AAYARLWYTL
PYSILTVPIT TALFTELSDS WAKENMDQFK KDLKHGINQI LFFTVPFMMY LMIFSMPLVS
IIGASKFTED QMLLTQQFLI GQSLALPLYG IGMYLQKVCS AMRRMTLYAV SATLGSVVQV
LVLLVGTSHF GMMFVATTSA IFYVVIDTIM LISLRKHLGQ IGLKSMVFAF ARSILFGLAG
SATALLIMVG LRAVIGVPDG RALYGVLYCI FAGIPAVLVT YGLAILFKSP ESAMLRSLVS
RVRS
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