| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0931 |
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| Symbol | |
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| ID | 8413802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1044073 |
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| End bp | 1045113 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022519 |
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| Product | Acetyl xylan esterase |
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| Protein accession | YP_003179951 |
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| Protein GI | 257784734 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3458] Acetyl esterase (deacetylase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.542507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAG AAACGCTTGA GCTGGCAGAA TTGAAAGCAG CTCATGCTTT GACGCCGTAT
CCTTCGGATT TTGAGGCGTT TTGGAAGGCA CGTATGGGGG AAGCGGATAA CGCTTCTTTA
AGCTGGCAGA TTGTCCCTTC AACAGAGGTT ACGTCATCTG CTTCAGCTCA CTTTTTTGAT
CTGACGTTTG TGGGTATTGA TGGAGCAGAG GTCTACGCAA AGTATCTGCG CCCAGAGACC
ACCTCAGGTG CAAAAACTCC TCTTGTTTTG CAGTTTCATG GCTATCCAGG GTCTTCTCGC
AGTTGGTTTG AGCAGAGCTC ATTTTTGGGC TTGGGCTGTT CGCTGATTGC GCTGGACAAC
CCTGGACAGG GTGGTCGTAG CTTGGACGGA AGCTCTTATA AGAGCACCAC TGTCTCTGGT
CACTTGGTGC TTGGACTAGA CGGACCTGCA GAGGACCTTT ACTACGTTCA CTTGTATCAG
AACATTCGCT TGCTCTGCAG GATTGTCCGT CAGCTTGAAG ACATTGATAC GAGCCGTATT
TTTGTGAATG GAGCATCGCA GGGCGGCGGC ATTGGTCTTG CAACCTGTGC ACTCAACCAA
GACCTTATCA ATAGAGCATC AATTCTTTAT CCTTTCCTCA CTGATTTTAG GTGCGTTTGG
GAGCTTAATG CTGATGAGGT AGCTTACGAG GGCATTCGTT ATTATTCCCG CTGGTTTGAT
GCAGACGGTT CTCGCGTTGA TGAGGTTTTT GCAAAGCTTG CCTACATTGA TTCAGTTAAT
TTTGCGCGCC TGGTTACCTG CCCTGTGCTT TTTGGCACTG GACTTGATGA TCCAGTTGTT
CCACCAGAGG CTCAGTTTGC TGCTTATAAT GCTCTTACCT GCCCAAAGAG ACATCTTATT
TACCCCGGAT ATGCACATGA AGAGATCGGC GATTTTGACG ATAAAATCAT CGATTTCTTC
TGCTTAGAAA ATGGCGTGCA AGCTCTTGAA AATTTGGACT CGTCATTTCC TGCTCAGGCA
GAATGCGAGG TGAGGGCATG A
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| Protein sequence | MHQETLELAE LKAAHALTPY PSDFEAFWKA RMGEADNASL SWQIVPSTEV TSSASAHFFD
LTFVGIDGAE VYAKYLRPET TSGAKTPLVL QFHGYPGSSR SWFEQSSFLG LGCSLIALDN
PGQGGRSLDG SSYKSTTVSG HLVLGLDGPA EDLYYVHLYQ NIRLLCRIVR QLEDIDTSRI
FVNGASQGGG IGLATCALNQ DLINRASILY PFLTDFRCVW ELNADEVAYE GIRYYSRWFD
ADGSRVDEVF AKLAYIDSVN FARLVTCPVL FGTGLDDPVV PPEAQFAAYN ALTCPKRHLI
YPGYAHEEIG DFDDKIIDFF CLENGVQALE NLDSSFPAQA ECEVRA
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