| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0929 |
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| Symbol | |
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| ID | 8413800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1042085 |
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| End bp | 1043008 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022517 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_003179949 |
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| Protein GI | 257784732 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.568933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAGTA ACGTACCATT TAGCGGTGTT GTTCCACCAG TTGTAACCCC AGATACCCCA
GACCATCAGC TTGATGTTGT GTCGTTTGAG CGCTCCATTA ATCGTCTTAT TGAGGCTGGC
GTAGACGGCC TCTTCTTCCT TGGCTCTTCT GGCGAGGTTG TCTTTGCAAC TGATGAGCGT
CGTGATCAGA TTGTTCGCGA GGCTGTCCGT ATTGTTAACC ACCGCGTTCC GGTCCTTGTG
GGCATTATTG ATACCGAAAC CGAGCGTGTC TTAGAGCACG GTCGCCGCGC CCTTGCTCTG
GGTGCCGATG CTCTTGTTGC AACCGCTCCT TTCTATGCAC TTGGCGGTCC AGCTGATGTC
GAGGAGCACT TCCGCATTCT TCACCAGGAG TTGGACGCAC CTTTGTTTGC GTATGACATT
CCTGTTTGCG TTCATACTAA GCTACCTTGG AAGATGCTCG CCCGTCTGGG TGCAGAAGGT
GTTCTTGCAG GCGTTAAGGA CTCTTCTGGC GATGATGTTT CCTTTAGATA TCTTGTTCAG
GAGAACGAGA AGAACGGTCA TCCTTTGACT CTTTTGACTG GTCATGAGAT TGTTGTCGAC
GGAGCTCTTC TTTCTGGTGC AGATGGCTCT GTTCCTGGTC TTGCTAATGT TGAGCCAAAG
GGTTACGTTC GCATGTGGAA AGCGGCCCAA GATGGTAACT GGTCAGAGGT TAAGCGTGAG
CAGGACCGGC TTAACGAGAT TTCTCACATC TTTGATGTCA CCACAGGTGT CCAGGGTTAT
GGCGCTGGCG TTGGTGCTTT TAAGTGCGCG CTTAATCTTA TGGGTATTTT TGATTCTGAC
CAGATGCCTC GTCCTGTTAA GCCACTTGAT GATCAGAACC GCGAGGCAAT CAAGCAGGTT
CTTGTTGCAA ATAACCTTCT CTAA
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| Protein sequence | MSSNVPFSGV VPPVVTPDTP DHQLDVVSFE RSINRLIEAG VDGLFFLGSS GEVVFATDER
RDQIVREAVR IVNHRVPVLV GIIDTETERV LEHGRRALAL GADALVATAP FYALGGPADV
EEHFRILHQE LDAPLFAYDI PVCVHTKLPW KMLARLGAEG VLAGVKDSSG DDVSFRYLVQ
ENEKNGHPLT LLTGHEIVVD GALLSGADGS VPGLANVEPK GYVRMWKAAQ DGNWSEVKRE
QDRLNEISHI FDVTTGVQGY GAGVGAFKCA LNLMGIFDSD QMPRPVKPLD DQNREAIKQV
LVANNLL
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