| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0928 |
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| Symbol | |
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| ID | 8413799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1041080 |
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| End bp | 1042069 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022516 |
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| Product | ROK family protein |
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| Protein accession | YP_003179948 |
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| Protein GI | 257784731 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.400197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTCCA AGTTTGTTTT TCCAACACAT GTTTGTGCAG TTGATATTGG TGGCACAAAA
ATTGCCTGTG GCATTGTCAC TCTTAATGAC TCCGATGCTC CGGTAGTTCA GTCCGTAAAG
AAGGTTCCTA CTAACGCAAA GGAGGGTGGC AAGCAGGTTC TTGCTACTGT TCTACAGGCA
ATTAGAGAAG CTCTTGCTCG CGCAGAAAAA CTTGGCCTTG CTATTTCTGG TGTTGGCATT
TCTTCTGCAG GTGTTGTTGA CCCTCGTACT GGTGACATTA CTTATGCAAA TGAGCTTATG
CCTGGTTGGG GTGGAACCGC TCTTGGCTCA GCAGTTACCA ACGAGTTTGG TGTTCCATGT
AGCGTGCTTA ATGACGTTCA CGCTCATGCT TTAGGTGAGG CTCGCCATGG AGCTGGCCAT
GGTAAAGACA GTGTTCTTAC TGTGGCTGTT GGTACCGGTA TTGGTGGCGC TTTTGTGAAC
CATGGCATCT TAATGCTAGG CGCTCACGAT GAGGCAGGCC ACATTGGTCA CGTTGCAACT
CCAGCAGCTG CAGGGGTTGA CTGTCCTTGC GGTGGAACTT CTCATCTTGA GCCTGTTTCT
GCAGGTCCTG GTATTATTCG CGAGTACGTC CGCCTTGGCG GCTCCGATAC GCTTGAGGAT
GGTTCTGCTC TTGATGGTGC AGAGATTGAT CGTAGAGCTC TTGCTGGCGA GAAGATCGCT
CAGGCTGCAG AAGAGCGCTC GGGCCGTGCG CTTGGTGAAG TTTTGGGTAG TATGTGTAAC
ATGCTTGACC CTTCTGTCAT CATCCTATCT GGTTCCGTTG CGGAGTGTGG CAAGTATTGG
CATGAGGCAC TTGAGGCTGC ATTTAAGCTG CAGGCAATGC CTCCTGTTCA GGCAACACCT
ATTGTGAAGG GCACACTTGG TGGAGAAGCC CCTCTTATTG GTGCCGCAGA AAATCTTGTT
CTACCTGGCT ATTTAGAGAC ACGTCTTTAG
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| Protein sequence | MDSKFVFPTH VCAVDIGGTK IACGIVTLND SDAPVVQSVK KVPTNAKEGG KQVLATVLQA
IREALARAEK LGLAISGVGI SSAGVVDPRT GDITYANELM PGWGGTALGS AVTNEFGVPC
SVLNDVHAHA LGEARHGAGH GKDSVLTVAV GTGIGGAFVN HGILMLGAHD EAGHIGHVAT
PAAAGVDCPC GGTSHLEPVS AGPGIIREYV RLGGSDTLED GSALDGAEID RRALAGEKIA
QAAEERSGRA LGEVLGSMCN MLDPSVIILS GSVAECGKYW HEALEAAFKL QAMPPVQATP
IVKGTLGGEA PLIGAAENLV LPGYLETRL
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