| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0925 |
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| Symbol | |
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| ID | 8413796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1038348 |
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| End bp | 1039316 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022513 |
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| Product | protein of unknown function DUF199 |
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| Protein accession | YP_003179945 |
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| Protein GI | 257784728 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1481] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00647] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.450836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATATA CTGCCCTGGT AAAAAATGAG CTGGTCAGCG TACCAGAAAA TCAGACGGAG
TGTGAATTAG CGCAACTTTC TGCCCTTATT CGTGTCTCGG GCACGTTGTC AATGCACGGA
CCTGGTAAAT TTGCCGTTCG CATTGTTACC GAGACTGGTA CCGTTGCCCG TACAGTTATT
AGTTCTTCTC GCCGTTTGTT TGATTTGGGT ACTTCCGTTG AGTATCGTCG CTCTATCATG
CATAAGAAAC GCAACTATTT ACTTGAGATT TCTGACCAGG ATTCGCTAGC AGACGCCCTC
TCTGCTCTTG GCATTTATAT ACCGGGAGAA GGTCTGGTGA GTGGCATTCC TAAGAGCGTT
GTTCGCACCA AGCAAGCTCA GCGAGCCTTT TTGCGTGGAG CGTTTATGGC GGGCGGGTTT
TTGGCTGATC CCTTAAAAGA CTTTCACTTA GAGATTGCTG TTTCTGGCGA AAGATTTGCA
ACTGAGCTGG TAAAACTTAT GGGATCGGTT GGCGTTAAAG CACGCCTCAA TCATCGTAAT
CGTCATACTA ATGCATTGAT GCGTACCAGA GAAATTTATG CCGTCTACCT TAAGAGTTCT
GACGACATAA TTAAGTTTTT GCGAGAGATT GGTGCACCTA CTATGGCACG CGCTATAGCT
TTTACGCGTG TACAAAAGCA TTATCGCAAC AACGTAAACA GAGTTGTCAA TGCAGAGATG
GCAAATCAAA CACGCTCTTC AAATGCAGCG GCAGATCAGT TAGTGCTTAT AGAAAAGGCC
GAGAAACTCA TTGGACTCAG ATCGTTGCCA CCTGCCGTTA GAGATTTTTG TGTTGCAAGA
AAAGACAACC CCGAGCTGTC ATTATCAGCA TTAGGGGAGT CGTTTGTACC ACCAGTATCT
AAGTCCGCTA TGTATCACCG ATTACTTCGT TTAGAAAAAA TCGTTCAGGA TTTAGAAAAA
GATGCATAA
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| Protein sequence | MSYTALVKNE LVSVPENQTE CELAQLSALI RVSGTLSMHG PGKFAVRIVT ETGTVARTVI
SSSRRLFDLG TSVEYRRSIM HKKRNYLLEI SDQDSLADAL SALGIYIPGE GLVSGIPKSV
VRTKQAQRAF LRGAFMAGGF LADPLKDFHL EIAVSGERFA TELVKLMGSV GVKARLNHRN
RHTNALMRTR EIYAVYLKSS DDIIKFLREI GAPTMARAIA FTRVQKHYRN NVNRVVNAEM
ANQTRSSNAA ADQLVLIEKA EKLIGLRSLP PAVRDFCVAR KDNPELSLSA LGESFVPPVS
KSAMYHRLLR LEKIVQDLEK DA
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