| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0922 |
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| Symbol | |
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| ID | 8413793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1035193 |
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| End bp | 1035960 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022510 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_003179942 |
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| Protein GI | 257784725 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.282683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAATC GTATGATTGC AGGTAACTGG AAGATGAATG AGACCTTCGC TGAGGGCATT
GAGCTTGCTC AGGGAATCGT CGATCAGCTT GCTTCCGGTA CCGGAAACGT TGACGTTGTT
GTTGCTCCAC CTCTTGTAGA CCTTAAGGGT GTCTCCGAGG TTCTTACTCA GGCAAACTCT
TCTGTTGCTC TTTCTGCACA AAATGTGTAT TGGGAGGAGT CTGGCGCATT TACTGGTGAA
ACCTCTCCAG CAATGCTGAC TTCTGTTGGT GCAACATACT GCATCATTGG TCACTCTGAG
CGTCGCGGTT ACTTTGGTGA GACCGACGAG GACATTAACC GCAAGGCAAA GGCACTGATG
GCTCATGACA TCGTTCCTAT TTCTTGCTGC GGTGAGTCTC TTGAGGTCCG TAATGCTGGC
ACTCACGTTC AGTTTGTTGT TGATCAGATT AAGGCAGACA CCAAGGGTCT TGAGATTACC
GATCCTTCCA AGTACGTAAT TGCTTATGAG CCAATCTGGG CAATTGGTAC TGGTATGACT
GCAACTGCTG ATGACGCACA GGAAGTTTGC GGCGCAATCC GTAAGACCCT GGTAGAGATC
TTTGGCGCAG AAATTGCAGA GGGCATCCGT ATTCTTTACG GTGGCTCTGC AAAGCCAGAG
AACGTTGGTG GCTTCCTCGA GAAAGAGGAC GTCGACGGCG CACTTGTTGG TGGCGCATCT
CTTAAGGCTG ATTCTTTTGT TGCAATGGTA AAGAGCGCTA TGAACTAA
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| Protein sequence | MRNRMIAGNW KMNETFAEGI ELAQGIVDQL ASGTGNVDVV VAPPLVDLKG VSEVLTQANS
SVALSAQNVY WEESGAFTGE TSPAMLTSVG ATYCIIGHSE RRGYFGETDE DINRKAKALM
AHDIVPISCC GESLEVRNAG THVQFVVDQI KADTKGLEIT DPSKYVIAYE PIWAIGTGMT
ATADDAQEVC GAIRKTLVEI FGAEIAEGIR ILYGGSAKPE NVGGFLEKED VDGALVGGAS
LKADSFVAMV KSAMN
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