| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0919 |
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| Symbol | |
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| ID | 8413790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1032270 |
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| End bp | 1033340 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022507 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003179939 |
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| Protein GI | 257784722 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.302373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAG AAGAGCTTCA AAAAAATGAC GATAAAAACG TCTCCGTTGA TGCGGGTCTT
ACTAATGCTG AGCGTGAGCT TCAGGCAGAT GCTAAGTATG ACAACAAAGA AGTTAAAAGA
ATTAGCTATG CTGGTCTTAT TGCAAGGCGT TTCTTCCGCC AGCGTTCTGC AGTAATTGGT
TTAATTATCC TTGGAATTAT GGTTCTTATT GCAATTTTTG GACCATATGT TACCTCGTTT
AATTACACAG ACGCTGACTT TACTGCAATT AATGTAGCTC CTAACGCAAA GCATTGGTTT
GGTACTGATG GTGCTGGCAT TGACCTTTAT GCCTGTGTTG TCCACGGCCT TGGCCGTTCT
TTGACCATTG GTATTAGCTA CGCAATCTTG ACCACTATTA TTTCGGCAAT TATTGGTACT
GCAATTGCAT ATGTTCGTGG CATTCCAGAG AAGATTGGTA TGTGGCTTCT TGATATGCTC
ATGGTTATTC CTAGCTTCTT GCTGGTTGCT ATGATTGTTC GTGCATCAGG TGGCGAGTCT
GGCTGGCTCA TGCTTATCTT TGGTCTGACT GCTTTTGGTT GGATTGGTCG CGCGCGTACT
ATCCGTACTA TGGCATTGTC TTTACGTGAG AGAGATTACG TCAAGGCTGC TAAGTACATG
GGTGTCTCGC CATTTACTAT CATCATTCGT CACCTTATTC CAAACCTTGG CTCAATTCTT
ATTATTGATT TGGTTTTGGC TGTTATTGGT GGTATTAACT CTGAGACTGC ATTCAGCTTC
TTGGGCCTTG GTATTAAGGC ACCAGATACT TCTCTTGGTT ATCTTCTGAG TGCTGGTTCT
TCTGCAATGC TTACTACTCC ATGGATGATT CTGATTCCAT CAGCATTTTT GATTGTTGTT
TGTGTTGGCC TGCAGCTCAT TGGCGATGGC CTTCGCGATG CCTTTGATCC TTATTCACGC
GCTGCTGGTA GCGTTAAAGA TCAAGAAGAG GATGATTCTT CTAAAGATGA CGCTCAGCTT
GATAATTTTG AGGGTAGCAT CGTTTCTGAA GAAACTACGG AGCGTGCATA A
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| Protein sequence | MSKEELQKND DKNVSVDAGL TNAERELQAD AKYDNKEVKR ISYAGLIARR FFRQRSAVIG
LIILGIMVLI AIFGPYVTSF NYTDADFTAI NVAPNAKHWF GTDGAGIDLY ACVVHGLGRS
LTIGISYAIL TTIISAIIGT AIAYVRGIPE KIGMWLLDML MVIPSFLLVA MIVRASGGES
GWLMLIFGLT AFGWIGRART IRTMALSLRE RDYVKAAKYM GVSPFTIIIR HLIPNLGSIL
IIDLVLAVIG GINSETAFSF LGLGIKAPDT SLGYLLSAGS SAMLTTPWMI LIPSAFLIVV
CVGLQLIGDG LRDAFDPYSR AAGSVKDQEE DDSSKDDAQL DNFEGSIVSE ETTERA
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