Gene Apar_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0908 
Symbol 
ID8413775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1017596 
End bp1018159 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content51% 
IMG OID645022492 
Productperoxiredoxin 
Protein accessionYP_003179928 
Protein GI257784711 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID[TIGR03137] peroxiredoxin 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000179552 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.606862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTA TTGGTAAGCA AATTGGTGAT TTTAAGGTAA ATGCATTTCA CAACGGTGAC 
ATCACCGAGG TAAGCAAAGA GTCCACACTG GGTAAGTGGA GCCTGTTCTT CTTCTATCCA
GCTGACTTTA CCTTTGTCTG CCCAACTGAG CTTGAAGATC TTGCTAACAA CTATGACAAG
TTTCAGGCTG CTGGCGCAGA GGTCTACTCT GTCTCTTGCG ACACTGAGTT TGTACACAAG
GCATGGCACG AGGAGTCCGA TCGTATCTCT AAGGTAACCT ACCCAATGCT CGCTGACCCA
GCTCACGTTC TTGCAAGGAA CTTTGAGGTT CTCATTGAGG ACTCAGGTCT TGCTGAGCGC
GGTGCTTTCA TCGTTGATCC AGAGGGTGTC ATCCAGGTTG AGCTTGTCAC CGCCGGTGGT
ATTGGCCGTA ACGCTGAGGA GCTTCTCCGC CTCCTCCAGG CTGCACAGTT TGTTGCAGAG
CATGGCGACC AGGTCTGCCC AGCTAAGTGG CAGCCAGGTG CTGAGACCCT GAAGCCAAGC
CTTGACCTTG TTGGTCAACT TTAA
 
Protein sequence
MSLIGKQIGD FKVNAFHNGD ITEVSKESTL GKWSLFFFYP ADFTFVCPTE LEDLANNYDK 
FQAAGAEVYS VSCDTEFVHK AWHEESDRIS KVTYPMLADP AHVLARNFEV LIEDSGLAER
GAFIVDPEGV IQVELVTAGG IGRNAEELLR LLQAAQFVAE HGDQVCPAKW QPGAETLKPS
LDLVGQL