| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0904 |
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| Symbol | |
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| ID | 8413770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1011895 |
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| End bp | 1012425 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022487 |
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| Product | PTS system, glucose subfamily, IIA subunit |
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| Protein accession | YP_003179924 |
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| Protein GI | 257784707 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.292557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACTCT TTGATCTTTT CAAGAAATCT TCCAAGACCG CTACGCCAGA GGCTCTTGCT
GTTTCTAACT ACACTGCTAA AACAATTTAT GCGCCAACCA GCGGAAAAGT AGTTGCGCTA
GAGAGCGTCC CTGATCCTGT TTTTGCAGGT GGCATGCTTG GACAGGGTCT AGGTATCTGG
CCTTTTGAGG GTGTTGTGTA CGCGCCGGTT TCGGGTACTA TTACTGCAAC TACTCCAACT
GTTCACGCAT TTGGAATCAC TGCCGATTCT GGAGAAGAGG TTTTGATTCA TGTGGGTGTT
GATACCGTTG AGATGAAGGG TGACGGTTTT TCTGCTCTTG TTGAGAAGGA TCAGCACGTT
GAGGTCGGTC AGCCACTCAT GACCTTTGAC CTGGATAAGG TTAAGGACGC GGGTCATCCT
GAGGTAGTCA TTCTTGCTAT CACTAACTCT AGTGAGTACA GCAACGTAGA GATTCTTGCC
GCTGCAGACC AGTCAGTTTC TGCTGGCGAG AAGGTCTGTG TGCTTGCATA A
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| Protein sequence | MGLFDLFKKS SKTATPEALA VSNYTAKTIY APTSGKVVAL ESVPDPVFAG GMLGQGLGIW
PFEGVVYAPV SGTITATTPT VHAFGITADS GEEVLIHVGV DTVEMKGDGF SALVEKDQHV
EVGQPLMTFD LDKVKDAGHP EVVILAITNS SEYSNVEILA AADQSVSAGE KVCVLA
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