Gene Apar_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0891 
Symbol 
ID8413757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp995616 
End bp997904 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content44% 
IMG OID645022474 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003179911 
Protein GI257784694 
COG category[R] General function prediction only 
COG ID[COG5263] FOG: Glucan-binding domain (YG repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0223841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.138276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AAACATACTT CTCTTGTAAG CCTTCCAAAC GCAAGCTCAT TGTCACTGCT 
TCTTTAAGTA TTGCTTTATT ATATAGTCTA CAGATAACAC CTGTTCTTGC AGAAAATTCT
ACTTCAGCAG ACCCCGTTAC TCCAATTACC ACATCAGATA ATCAGGGTAA TAATGTAACT
GATGCTTCGA CTTCTCCTAC AGAATCCAAT GACATCGATG AAACTAAAAC TCCTGTCGAA
CCAGAAACTC CTGCAAAAAC AGAAGATCCT GCAAAAACAG AAGATCCTAC AGAACCAGAA
AATCCCACTA AAACTCCTGA CATTGCTAAA GAAGCACCTA AAATTACGGG CTGGAAGATA
GAAAATGGTC AATCCCATTA TTACGCTGAA GATGGAACTC TTTCTACAAG TCAATGGATT
AAAGATGACC AGGGATGGCA CTATGTAGAT GCAACGGGCT CTGCAGTTAA GGGTTGGTAT
ACCACTCCAA ATGGCAAGAC TTGGTACTTT GATCCTTCTG ACCCACATCA TCCAGCAATT
ATTGGTGATA CTGAAATTAA CGGCAAATCT TACTACTTTG ATGAGGGTTA TGGCCTCCTT
AGAAATGGCT GGGTACATCG AGCAGATGGC TCTTGGTCTT GGGCTGATTC AGACGGCTCA
CTACACTCTG ATTGGAAATA CATCAACGGT AAATGGTTTT ACTTTGATAC AGAAGACCCT
CTTCATCGCA TGCTGACTGG TGCTTTCCAA TTCTCAAGTG GCACCTACTA CGTTGATGAG
TCTCTTGGTA TGACTTCCAA TAATTGGGTA CATCTTCCAG ATGGTAACTG GACATGGACT
CAGTCTAGTG GTGCTTTTGC TTCTGGTTGG TATAACACTC CAAATGGCAA GACCTGGTAC
TTTGATCCTT CTAATCCATA CCATCCAGCA CTACTTGGAG AACAAAAAAT TGACGGTAAG
TCCTACTACT TTGATGAGGG CTATGGTCTT CTTAGGAATA GCTGGGTTCA TCACAGTGAC
GGCACATGGT CTTGGGTAGA TACATATGGC GCCTTTCAAC CTGAATGGAA AAAAATTGAC
GGTAGATGGT TCTACTTTGA TCCAGAAGAT GAATACTGTC GCTTAAAAAC TGGTGCTTTC
CAAATCTCAA GTGGTACCTA CTACGTTGAT GAAAATAAAG GTATGACCTC TCACGACTGG
GTACGACTTC CTGACGGAAA CTGGGCGTGG GCAGACTGGT CTGGTGCATT TGTATCTAGC
TGGTTCAACA CTCCAAATGG CAAGACCTGG TACTTTGATC CTTCTAATCC ATATCATCCA
GCACTACTTG GAGAACAAAA AATTGAAGGT AAGTCCTACT ACTTTGATGA GGGCTATGGT
CTTGCTCGTA ACCAATGGAT TACCCGTCCC GATGGTATAA AGCGTTGGGC AGGTCCAGAT
GGAGTACTTA CGGGGTATCT TTCTCCTGAC AATATCTTTA CTGCAGATAA CGGTACTCAG
CCCACAGGTA CCGTGAAACT TCCAGGACTT ACTCTTCATA TTGGCTCAGA CCACAAAGTA
AAAACTGGTT GGGTGAAAGA AAACGGCAAG GACTATTACT ATCTCAATGA TGGTTCAGCT
GCCTCAGATT GGTTCAATAT TCAGGGAACT TGGTATTACT TCAACACAAA CGGTGAGAAA
CAGACTGGTT GGATTCATCT CAGAAGTGGC TGGTATTACC TAGGAGCCGA CGGCAAAATG
AGAACTGGCT GGATTAAAGA TGATGGCAAG GACTATTATC TTGATTCCAA CGGAACCATG
GTAACTGGCT ACACCACATG GGGCAGCAAA CTCTATTGGG CCGGTGCAGA TGGCGCTATG
AAGGAGCAGC CTTGCTACTA CCCGGATATG TATCGTTATG CTCAGAACTA CTACAGTGCT
ACCAACTGGC TTATCCAAAT AGATACTACC GGAAATCGCT TTGCAGTATA CAAAGGTTCA
CACGGTAACT GGGTTGTTTG GTACGAATGG CGATGCACCA CAGGAGCGCC AGGAATGTGG
ACTCCACATG GTCAATTTAC TGCAGGTCAC AAAGGTCTCT ACTTTGGCTC TGGTTATAGA
TGCTGGTACT ACACAACCAT TTCTGGAGAG TATCTTATTC ACTCCATCCT CTATCATGCA
GATGGTTATA CCGTCCGTGA TGGTAGACTG GGCTACAACG GTTCTCATGG TTGTGTTCGT
CTTGCAACAG AAAATGCTAA GTGGGTATAT GACAACATCC CTTATGGAAC CAAGATTGTT
ATCTGGTAA
 
Protein sequence
MKNKTYFSCK PSKRKLIVTA SLSIALLYSL QITPVLAENS TSADPVTPIT TSDNQGNNVT 
DASTSPTESN DIDETKTPVE PETPAKTEDP AKTEDPTEPE NPTKTPDIAK EAPKITGWKI
ENGQSHYYAE DGTLSTSQWI KDDQGWHYVD ATGSAVKGWY TTPNGKTWYF DPSDPHHPAI
IGDTEINGKS YYFDEGYGLL RNGWVHRADG SWSWADSDGS LHSDWKYING KWFYFDTEDP
LHRMLTGAFQ FSSGTYYVDE SLGMTSNNWV HLPDGNWTWT QSSGAFASGW YNTPNGKTWY
FDPSNPYHPA LLGEQKIDGK SYYFDEGYGL LRNSWVHHSD GTWSWVDTYG AFQPEWKKID
GRWFYFDPED EYCRLKTGAF QISSGTYYVD ENKGMTSHDW VRLPDGNWAW ADWSGAFVSS
WFNTPNGKTW YFDPSNPYHP ALLGEQKIEG KSYYFDEGYG LARNQWITRP DGIKRWAGPD
GVLTGYLSPD NIFTADNGTQ PTGTVKLPGL TLHIGSDHKV KTGWVKENGK DYYYLNDGSA
ASDWFNIQGT WYYFNTNGEK QTGWIHLRSG WYYLGADGKM RTGWIKDDGK DYYLDSNGTM
VTGYTTWGSK LYWAGADGAM KEQPCYYPDM YRYAQNYYSA TNWLIQIDTT GNRFAVYKGS
HGNWVVWYEW RCTTGAPGMW TPHGQFTAGH KGLYFGSGYR CWYYTTISGE YLIHSILYHA
DGYTVRDGRL GYNGSHGCVR LATENAKWVY DNIPYGTKIV IW