Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0891 |
Symbol | |
ID | 8413757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 995616 |
End bp | 997904 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645022474 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_003179911 |
Protein GI | 257784694 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0223841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.138276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA AAACATACTT CTCTTGTAAG CCTTCCAAAC GCAAGCTCAT TGTCACTGCT TCTTTAAGTA TTGCTTTATT ATATAGTCTA CAGATAACAC CTGTTCTTGC AGAAAATTCT ACTTCAGCAG ACCCCGTTAC TCCAATTACC ACATCAGATA ATCAGGGTAA TAATGTAACT GATGCTTCGA CTTCTCCTAC AGAATCCAAT GACATCGATG AAACTAAAAC TCCTGTCGAA CCAGAAACTC CTGCAAAAAC AGAAGATCCT GCAAAAACAG AAGATCCTAC AGAACCAGAA AATCCCACTA AAACTCCTGA CATTGCTAAA GAAGCACCTA AAATTACGGG CTGGAAGATA GAAAATGGTC AATCCCATTA TTACGCTGAA GATGGAACTC TTTCTACAAG TCAATGGATT AAAGATGACC AGGGATGGCA CTATGTAGAT GCAACGGGCT CTGCAGTTAA GGGTTGGTAT ACCACTCCAA ATGGCAAGAC TTGGTACTTT GATCCTTCTG ACCCACATCA TCCAGCAATT ATTGGTGATA CTGAAATTAA CGGCAAATCT TACTACTTTG ATGAGGGTTA TGGCCTCCTT AGAAATGGCT GGGTACATCG AGCAGATGGC TCTTGGTCTT GGGCTGATTC AGACGGCTCA CTACACTCTG ATTGGAAATA CATCAACGGT AAATGGTTTT ACTTTGATAC AGAAGACCCT CTTCATCGCA TGCTGACTGG TGCTTTCCAA TTCTCAAGTG GCACCTACTA CGTTGATGAG TCTCTTGGTA TGACTTCCAA TAATTGGGTA CATCTTCCAG ATGGTAACTG GACATGGACT CAGTCTAGTG GTGCTTTTGC TTCTGGTTGG TATAACACTC CAAATGGCAA GACCTGGTAC TTTGATCCTT CTAATCCATA CCATCCAGCA CTACTTGGAG AACAAAAAAT TGACGGTAAG TCCTACTACT TTGATGAGGG CTATGGTCTT CTTAGGAATA GCTGGGTTCA TCACAGTGAC GGCACATGGT CTTGGGTAGA TACATATGGC GCCTTTCAAC CTGAATGGAA AAAAATTGAC GGTAGATGGT TCTACTTTGA TCCAGAAGAT GAATACTGTC GCTTAAAAAC TGGTGCTTTC CAAATCTCAA GTGGTACCTA CTACGTTGAT GAAAATAAAG GTATGACCTC TCACGACTGG GTACGACTTC CTGACGGAAA CTGGGCGTGG GCAGACTGGT CTGGTGCATT TGTATCTAGC TGGTTCAACA CTCCAAATGG CAAGACCTGG TACTTTGATC CTTCTAATCC ATATCATCCA GCACTACTTG GAGAACAAAA AATTGAAGGT AAGTCCTACT ACTTTGATGA GGGCTATGGT CTTGCTCGTA ACCAATGGAT TACCCGTCCC GATGGTATAA AGCGTTGGGC AGGTCCAGAT GGAGTACTTA CGGGGTATCT TTCTCCTGAC AATATCTTTA CTGCAGATAA CGGTACTCAG CCCACAGGTA CCGTGAAACT TCCAGGACTT ACTCTTCATA TTGGCTCAGA CCACAAAGTA AAAACTGGTT GGGTGAAAGA AAACGGCAAG GACTATTACT ATCTCAATGA TGGTTCAGCT GCCTCAGATT GGTTCAATAT TCAGGGAACT TGGTATTACT TCAACACAAA CGGTGAGAAA CAGACTGGTT GGATTCATCT CAGAAGTGGC TGGTATTACC TAGGAGCCGA CGGCAAAATG AGAACTGGCT GGATTAAAGA TGATGGCAAG GACTATTATC TTGATTCCAA CGGAACCATG GTAACTGGCT ACACCACATG GGGCAGCAAA CTCTATTGGG CCGGTGCAGA TGGCGCTATG AAGGAGCAGC CTTGCTACTA CCCGGATATG TATCGTTATG CTCAGAACTA CTACAGTGCT ACCAACTGGC TTATCCAAAT AGATACTACC GGAAATCGCT TTGCAGTATA CAAAGGTTCA CACGGTAACT GGGTTGTTTG GTACGAATGG CGATGCACCA CAGGAGCGCC AGGAATGTGG ACTCCACATG GTCAATTTAC TGCAGGTCAC AAAGGTCTCT ACTTTGGCTC TGGTTATAGA TGCTGGTACT ACACAACCAT TTCTGGAGAG TATCTTATTC ACTCCATCCT CTATCATGCA GATGGTTATA CCGTCCGTGA TGGTAGACTG GGCTACAACG GTTCTCATGG TTGTGTTCGT CTTGCAACAG AAAATGCTAA GTGGGTATAT GACAACATCC CTTATGGAAC CAAGATTGTT ATCTGGTAA
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Protein sequence | MKNKTYFSCK PSKRKLIVTA SLSIALLYSL QITPVLAENS TSADPVTPIT TSDNQGNNVT DASTSPTESN DIDETKTPVE PETPAKTEDP AKTEDPTEPE NPTKTPDIAK EAPKITGWKI ENGQSHYYAE DGTLSTSQWI KDDQGWHYVD ATGSAVKGWY TTPNGKTWYF DPSDPHHPAI IGDTEINGKS YYFDEGYGLL RNGWVHRADG SWSWADSDGS LHSDWKYING KWFYFDTEDP LHRMLTGAFQ FSSGTYYVDE SLGMTSNNWV HLPDGNWTWT QSSGAFASGW YNTPNGKTWY FDPSNPYHPA LLGEQKIDGK SYYFDEGYGL LRNSWVHHSD GTWSWVDTYG AFQPEWKKID GRWFYFDPED EYCRLKTGAF QISSGTYYVD ENKGMTSHDW VRLPDGNWAW ADWSGAFVSS WFNTPNGKTW YFDPSNPYHP ALLGEQKIEG KSYYFDEGYG LARNQWITRP DGIKRWAGPD GVLTGYLSPD NIFTADNGTQ PTGTVKLPGL TLHIGSDHKV KTGWVKENGK DYYYLNDGSA ASDWFNIQGT WYYFNTNGEK QTGWIHLRSG WYYLGADGKM RTGWIKDDGK DYYLDSNGTM VTGYTTWGSK LYWAGADGAM KEQPCYYPDM YRYAQNYYSA TNWLIQIDTT GNRFAVYKGS HGNWVVWYEW RCTTGAPGMW TPHGQFTAGH KGLYFGSGYR CWYYTTISGE YLIHSILYHA DGYTVRDGRL GYNGSHGCVR LATENAKWVY DNIPYGTKIV IW
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