| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0885 |
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| Symbol | |
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| ID | 8413751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 986293 |
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| End bp | 988209 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022468 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179905 |
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| Protein GI | 257784688 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0703423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG AAGTAGAAAC AAATTACGCA AGGCCAAAGC TTCCCGTGGG AAAAATTCTT
ACCCGTACCA TTAAAATGCT CTGGGAGTTC TACCCTGTCC TTCTCCCTAT AGCACTTCTT
GGTGCTGTTA TTCAAGCAAT TATGCAGTCA CTTCCAAGTG TTTTCTTAGA GCGAATTCTC
TCCATCATTT CTAACTTTAT TGATACCGGT GACTGGAGTT CTGCAGAAGG CCTGGTCTTC
CAGAACGTTG CACTTCTCGC CACCTTCTAT GTCATTGGAC TTCTTGCAAA CATCATCTCT
ACCCAGGGTA TGGCTATTAT CACCCAAGGA GCACTGCAAA AATGGCGCTC AAAGATGTTC
TCGCACATGC AAGATTTGCC AATTAGGTAT TTTGATACAC ATCTCAACGG CGACATCATG
AGCTATTACA CTAACGATAT TGATGCCATG CGCCAGATGA TTGGCACCAG TCTTCCAAAC
CTCCTCTTTA CCTTTGTGGT AATAATCGCA GTAGTGTTTA TCATGTTCTA CTACAGCGCA
CTTATGGCTC TGGTTGTTCT GTTTAGTGTC TCTCTAATGG CTCTTACTAC CAAAAACCTT
GGTGGTAAGT CAGCTAAGAA CTTTGTTAAA ACTCAAAAAA CCACAGCAGA CGTTGAGGGT
CATATTCAGG AAATGATGAA TGGCGAGAAG GTCGTTAAGG TCTTTAGCCA CGAAGCAGAA
ACCATTGAAT CCTTTGATAA GATTAACGAC GATCTGATGA TTGTTGCAAG GAACGCGAAT
CTCTATGCAA ACACGCTTAT GCCTATCCTC AACAACTTAG GCAACATCAT GTACGTTATA
GTTGCTATTG TTTCTGGTGT GTTTATTGCT TTAAATATTC AGAACGTCTC TTTGTCCGGA
CTTCCTTTCA CCATTGCAGT AGCTGTCCCC TTCCTCAATA TGACACGTCA GTTCTCTGCG
CAAATTAACC AGATTTCTGG TCAGATTAAC TCCGTTGTCA TGGGTGTTGC TGGTGCTAAT
CGTATCTTTG AACTGCTCGA TGAGCCTGCT GAAACTGATA AAGGTTACGT TACCTTAGTC
AACTCAGAAA CAATTGACGG ACAGATACAG GAAGCCGAGT ACCGTACCGG CTACTGGGCT
TGGAAGTATC CGCATAGCGA TGGCACGGTT ACTTACACTC CAATCAAAGG TGATGTGCGT
CTCTTTGATG TTGATTTTGG CTACGAGCCA GGAAACACCG TGTTACATGA TATTTCTCTT
TATGCAAAAC CTGGTCAGAA GGTTGCTTTT GTTGGTGCAA CAGGTGCAGG TAAAACAACC
ATTACTAATC TTCTTAACCG TTTCTACGAC ATTGAAGACG GTAAAATTCG TTACGATGGC
ATCAACATCA ATAAAATTAA AAAGAGCTCT CTCCGCCGCG CTCTTGGCAT TGTTCTTCAA
GACGTCAATC TCTTTACAGG TACTGTTTTA GATAACATTC GCTACGGCCG CCTTGACGCC
ACTGACGAAG ACTGCGTAAA GGCTGCAAAG CTTGCCGGAG CTGATGACTT TATCAAGCGT
CTACCAAACG GCTATCACAC TATACTCAAG GATAACGGTA GCGCACTTTC CCAGGGACAA
CGCCAGCTCA TTTCCATTGC CCGTGCAGCA GTTGCAGATC CACCAGTCAT GATCTTGGAC
GAGGCTACCT CCAGTATTGA TACACGTACT GAAGCTATTG TTCAGCGTGG TATGGATGCT
CTTATGTACG ACCGCACCAC CTTTGTTATT GCCCACCGTC TCTCTACAGT TAGAAACGCA
GATGTTATTG TCGTTCTTGA CCACGGTCGC ATTATTGAGC GTGGTACACA CGACGAACTT
CTCACCAAGA GAGGAACGTA CTACCAGCTC TACACTGGAG CCTTTGAGCT CGAGTAA
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| Protein sequence | MSKEVETNYA RPKLPVGKIL TRTIKMLWEF YPVLLPIALL GAVIQAIMQS LPSVFLERIL
SIISNFIDTG DWSSAEGLVF QNVALLATFY VIGLLANIIS TQGMAIITQG ALQKWRSKMF
SHMQDLPIRY FDTHLNGDIM SYYTNDIDAM RQMIGTSLPN LLFTFVVIIA VVFIMFYYSA
LMALVVLFSV SLMALTTKNL GGKSAKNFVK TQKTTADVEG HIQEMMNGEK VVKVFSHEAE
TIESFDKIND DLMIVARNAN LYANTLMPIL NNLGNIMYVI VAIVSGVFIA LNIQNVSLSG
LPFTIAVAVP FLNMTRQFSA QINQISGQIN SVVMGVAGAN RIFELLDEPA ETDKGYVTLV
NSETIDGQIQ EAEYRTGYWA WKYPHSDGTV TYTPIKGDVR LFDVDFGYEP GNTVLHDISL
YAKPGQKVAF VGATGAGKTT ITNLLNRFYD IEDGKIRYDG ININKIKKSS LRRALGIVLQ
DVNLFTGTVL DNIRYGRLDA TDEDCVKAAK LAGADDFIKR LPNGYHTILK DNGSALSQGQ
RQLISIARAA VADPPVMILD EATSSIDTRT EAIVQRGMDA LMYDRTTFVI AHRLSTVRNA
DVIVVLDHGR IIERGTHDEL LTKRGTYYQL YTGAFELE
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