| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0878 |
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| Symbol | |
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| ID | 8413744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 978070 |
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| End bp | 979233 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022461 |
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| Product | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase |
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| Protein accession | YP_003179898 |
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| Protein GI | 257784681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.545949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACTG ACGATTTTGA TTACAATCTT CCAGAAGAAC GCATTGCCCA GACTCCCGCT
GAGCCTAGAG ACTCTTGTAG GTTGTTGGTG CTGCATAGAG AAGATGGTCG CATAGAGCAC
AAGCGCTTTA CCGATATCGT GGAGTATCTT GATCCGGGTG ACTTGGTTGT AGTTAATCAA
ACACGCGTTA TGCCAGCACG TCTTGTGGGC AAAAAGCAAA ATACGGGTGG CGTGTCAGAA
ACACTGCTTT TAAAACGTCG AGAAGACATT GATGCATTGG GTAGTGTATG GGAGTGTCTG
GTAAATCCTG GCAAACGCCT TAAGCCTGGT GCAGTAATTG AGTATCGCGC GGGTGGCCTG
CATGCTCCTG ATTCAGCTCC TGTGGTGCTC ACGGGCACTA TTGTGGATTT TGTTGATGAC
AACAGGGGAG GACGCCTGGT GCGTTTTGAA GCTCAGGGAG AGCGTACCCT TGATGAGGCT
ATTCATGAGG CAGGTCACGT CCCTCTACCT CCTTATATTA CGCAGTATGA GGGAGATCCA
GAGAAATATC AGACGGTTTA TGCTATGCAG GATGAGCACT CCGCTGCAGC TCCTACTGCA
GGCCTTCACT TTACTCCAAA ACTTATTGAA ACCATTAAAG CAAAGGGCGT TCAGTGGGCA
TCTGTTGAGC TTGAGGTTGG TATTGATACC TTTAGGTTAG TAACGGAGGA TGACCCCACA
AAGCACGTCA TTCATACTGA GCGCTACCAC GTAGCTCCAG AAGTTGTTGA AGCAGTAAAG
GCTACTAAAG CGGCTGGCCA TAAGGTCATT GCTATTGGTA CTACCAGTGT CCGCTCACTT
GAGAGCACCT GGGATAGCCA GCTTCCTGCA GACGAGCCTC CTGTTGTTGC GCATCGCTTT
GAGGAGGCGG AAGATTCTGC TGCGGTGACC CACAAAGGTG ATATGGTTGC CCGAGAAAAC
GCAACTACCA ATCTGTATTT GATGCCAGGT TCTACGTTTC ATGTGGTAGA CACTATGGTG
ACTAACTTCC ATGTTCCACG CTCAACTTTG ATGATGCTTG TTTCCGCTTT TGCAACGCGT
GAGCAGATTA TGAATGCCTA TCAAAGTGCC ATTGACGAGA AGTACCGTTT CTTGTCATTT
GGTGACGCTA TGATCATTAT TTAG
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| Protein sequence | MRTDDFDYNL PEERIAQTPA EPRDSCRLLV LHREDGRIEH KRFTDIVEYL DPGDLVVVNQ
TRVMPARLVG KKQNTGGVSE TLLLKRREDI DALGSVWECL VNPGKRLKPG AVIEYRAGGL
HAPDSAPVVL TGTIVDFVDD NRGGRLVRFE AQGERTLDEA IHEAGHVPLP PYITQYEGDP
EKYQTVYAMQ DEHSAAAPTA GLHFTPKLIE TIKAKGVQWA SVELEVGIDT FRLVTEDDPT
KHVIHTERYH VAPEVVEAVK ATKAAGHKVI AIGTTSVRSL ESTWDSQLPA DEPPVVAHRF
EEAEDSAAVT HKGDMVAREN ATTNLYLMPG STFHVVDTMV TNFHVPRSTL MMLVSAFATR
EQIMNAYQSA IDEKYRFLSF GDAMIII
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