| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0875 |
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| Symbol | |
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| ID | 8413741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 975749 |
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| End bp | 976126 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022458 |
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| Product | membrane protein of unknown function |
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| Protein accession | YP_003179895 |
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| Protein GI | 257784678 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1950] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.725827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.295659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATTTG TTGCAACATG GCTTGTAACT ACTGTTGCTA CTTTGGTGAC ATGTACCGTA
ATTCCTGGTA TGACTATTGT GGGAGGCTCG TGGGCAGGAC CTATTCTGTT TTCGTTGGTG
CTTGCAGCAG TTAATACTGG CATCAAGCCT ATTGTTAAGC TACTCTCGTT GCCCATTAAC
GTGTTGACCT TAGGCATTTT CTCGCTCTTT ATTAATGCTT TTATGCTTGA GCTTGCAAGT
TTTATCTCAA GGAATTTGTT GCACGCAGGC GTTGCTATTG ATTCTTTAGG TACCGCTATC
CTGGGATCAA TAGTTATCTC GATTGTTTCT TCAGTTGTTA TAAGCCTTAC TGGTCTGAAG
AAGGAGAACC TTTCCTAA
|
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| Protein sequence | MTFVATWLVT TVATLVTCTV IPGMTIVGGS WAGPILFSLV LAAVNTGIKP IVKLLSLPIN
VLTLGIFSLF INAFMLELAS FISRNLLHAG VAIDSLGTAI LGSIVISIVS SVVISLTGLK
KENLS
|
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