Gene Apar_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0862 
Symbol 
ID8413728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp957863 
End bp958210 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content45% 
IMG OID645022445 
Productprotein of unknown function DUF322 
Protein accessionYP_003179882 
Protein GI257784665 
COG category[S] Function unknown 
COG ID[COG1302] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000204946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.791089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG CTGTTCCTGG AACATTAAGA GTTTCTAATG ATTGCCTTGC TGACTTGGCA 
GGTTATGCAG CTATGGAATG TTATGGCGTT GTTGGCATGG CAGAGATTGA TGAGGCAGCA
GGTGTTGCTC GTCTTCTTCC AACTTACCGA CTTCGCAAGG GTATTGATGT AACCCCAACT
TCTAAGGGAG TTCAGGTTGA CCTCCATATT GTTGTTGAGC AGGGCGTTAA CATGGCGTCC
GTTGTCGACA ATCTTGAGAG CTCAGTAAAG TTTTTGCTTA AGCAAATTGC AGAGCTTTCA
TGTGTTGATG TAACTGTACA TATCGAGGCC ATGCGTAATT CTCGCTAA
 
Protein sequence
MTTAVPGTLR VSNDCLADLA GYAAMECYGV VGMAEIDEAA GVARLLPTYR LRKGIDVTPT 
SKGVQVDLHI VVEQGVNMAS VVDNLESSVK FLLKQIAELS CVDVTVHIEA MRNSR