Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0862 |
Symbol | |
ID | 8413728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 957863 |
End bp | 958210 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022445 |
Product | protein of unknown function DUF322 |
Protein accession | YP_003179882 |
Protein GI | 257784665 |
COG category | [S] Function unknown |
COG ID | [COG1302] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000204946 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.791089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTG CTGTTCCTGG AACATTAAGA GTTTCTAATG ATTGCCTTGC TGACTTGGCA GGTTATGCAG CTATGGAATG TTATGGCGTT GTTGGCATGG CAGAGATTGA TGAGGCAGCA GGTGTTGCTC GTCTTCTTCC AACTTACCGA CTTCGCAAGG GTATTGATGT AACCCCAACT TCTAAGGGAG TTCAGGTTGA CCTCCATATT GTTGTTGAGC AGGGCGTTAA CATGGCGTCC GTTGTCGACA ATCTTGAGAG CTCAGTAAAG TTTTTGCTTA AGCAAATTGC AGAGCTTTCA TGTGTTGATG TAACTGTACA TATCGAGGCC ATGCGTAATT CTCGCTAA
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Protein sequence | MTTAVPGTLR VSNDCLADLA GYAAMECYGV VGMAEIDEAA GVARLLPTYR LRKGIDVTPT SKGVQVDLHI VVEQGVNMAS VVDNLESSVK FLLKQIAELS CVDVTVHIEA MRNSR
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