| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0851 |
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| Symbol | |
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| ID | 8413717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 945539 |
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| End bp | 949078 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022434 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003179871 |
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| Protein GI | 257784654 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.687128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATTTAA AATCGCTGAC ACTCAAGGGT TTTAAGTCAT TTGCCGATAA AACTCAGATG
GTTTTTGACC CTGGTCTTAC TGTTGTCGTT GGTCCAAACG GCTCAGGCAA GTCTAATGTC
TCTGACGCAA TACTATGGGT ATTGGGTGAG CAGAGCGCAA AGATGCTGCG TGGACAAGCT
ATGGAAGACG TTATCTTCTC TGGCTCATCA GCAAGGGGAG CGGTGGGCGT TGCTGAGGTA
ACGTTGGTCT TGGACAACTC TGACCATACC ATTCCTATTG ATTTTTCTGA AATTGGTATC
ACCAGACGTA TGTATCGTTC TGGAGAGTCT GAGTACCTGA TTAACGGTGC GCCTTCAAGG
CTCATGGACA TCCAGGACAT CCTACATGAC TCTGGCCTGG GCAAAGATAC ACATTCCATC
ATTTCTCAAG GTAAGCTTGA CTCCATCTTG TCCAGTCGTC CTGAGCAGCG TCGTGAGCTC
ATTGAAGAAG CAGCGGATAT TTCCAAGCAT CGTCGCCGTA AAGAGCGAGC AGAACGCAAG
ATTTCTTCCA TGGATGAAAA TCTGACGCGA GCCAAAGTGG TTTCTCGTGA GATTACTCGT
CAGCTTAAAC CGCTTGAGAG GCAGGTAGAC AAGGCTTCTC GCGCAAAAGA TTTGTCCGCT
CAGCTTAAGG ATTTGACAGT ACAGCTTGCG GTTGATGACC TTCGTCAGCT GCAATTTGCG
CACAGCAAGC TTGAGGTTCG CGCTAAAGAG GCAGAGGCTG CTATTGAGCT TGCACAGTAT
CGTGCGAGCG AGAAAAACCG TGAGCTTGAA AAGCTCCAGT CGCTCCTTGA GCAAAAAGGT
CTCTTTGTTG GAGACCTAGG CGAGCAGCGC CGCCGTATGC AAGAGATTCT TGGTCGTATG
GGCTCTGACA TGCGTCTTTT GGAGGAGAAG GGCAAGAACA TGGTTTCTCG CCTTTCTGAT
ACACGCATGC AACTTTCTGT GATGGATAAA CAGAAGGCTG ACGCTGCAAA AGAGAAGGAA
GAGCTTTCTG GTCAGCTGGC AACAATTCGC GCAAAGGTTG CAGATCTGAC AGAGAGTGTG
AATACACTTC AAGAGGCCGC CAACCAGGCA ATCGCCGAGC GTCGTGCTCT TGATGTAAAG
ATTTCTGACT GTACTGCGTC TGAACGCAGT GCTCGTAATA CTGCTGATAA AGAGACGCTT
GCGTATGTAA AGCTTGAAGA ACAGATTGCT CATGCGCAGG TAGAAGATCA GATGTTTGAG
TCTAGGTTGA CTCAGATTAC TGAGGCACTT GAGATTGCTC ACGCTGCTCT GGAAGACAGT
GGTATTAAAG AAGCAGAGCT CACTACAGCT CTTGATAAAG CTCGCCAGGA ATCCGAGGCG
TTTGTCGCTG AGATTTCTGA GCGCGCTTCT GCACTTGAGG CCGCTCGTGA GGCAGAACGT
ACCGCTCGTC AGGAGCTTTC TAGCAGTGAG GCTACGCTTG AGGCACTTCG TGCCCTTGAT
GTAGAAGTGC AAAAGGGAAG TCCTCTGGCA GAAAAACTTG TTTCTGACAC TGCAACTGCT
TCTCTTGTTT CTGGCAGACT TGCCGATTAC CTTGAGGTTC AACCAAAGTT TGAGGCTCTT
GTTGAGCAAC TTCTAGGAGA AGATCTTTCC GCACTTGTTG TAGATAAGCG GCAAAATATC
CACGTTCTCT TTGAGCGTGT TCAGGAGCTC TCTGAAGATG GCAAGGCTAC ACTCGTCACT
TTTTCTGATG TAACTTCATC TCTTGTTGCT CCAGCTCATA CAACGCCTCT GCTCGAACAT
GTTTCCGCTC AGAAGGGTGC TGAAGCTCTT GTTCAAGAGC TCTTTGGTCA CGTTTTTGTA
GCCCAGAGTC TTGATGATGC CTACATTGCA CGCAAAAATG AGCCTCGCGG TCTTTACGTT
CTTCTTGACG GTACGTTACT CTATCCAGAT GGTCGCCTGG TCTTGGGACA TGCGTCTCGG
GCTGAGGATG GCTCTCTTGA ACGCAAGCGT CGCATTCGTG AACTTGAGAT TGCTCTTCCA
GCACTCAAAC GTCACCTTGA GGCTGCTCGC TCTGCAGTTA CTAACTGTGA GAACGAACTG
GCATCAGTTC GCGAGAAAAG CGCGCAGTCC AAGGGAGAGG TCGCACGCCT CAATGGTGAG
CTTACATCCA TTGCTTCAGA GAGAGGCCGT CTTGAGGGAC AGGTTGCTTC TTCTCAGGCA
GAGTTGAAAC AGGTCAGCAC TTCTCGAGAG CAAGCAAAAG AACGCGCGCA GGAGGCTCAT
ACGCACATTG ACGAGCATAA GCGTGCAGCA GAAGAGGCTA AGGCTCGCAT GGAGTCGCTT
GCTTCTGAGC TCAAGGAGTT GCAGGATCAG CATGAGGATG CCATTCGTGC ACAGGGTAGG
GCCAACCGAG AGCTTTCGGA TGCAAAGACA GACTTAACTG TTGCAAAAGA GCGCGCAACT
AGTATGGTTT CTCGCCAGGC AGAGCTTGAA AGGCGTCTCT CTCAGCTGGA CGAGCAGCTT
GTTGCTGCTA AGCAGGCAAC GCATGCGCTT GAGGTAATTA GGCTGCGTGT GGACCCACTG
TACAAGCGCT ATGATGCCTT GCATCAGAAG GCGCTCGAGT GGGCGTCCAG ACTCAAGGAC
CGCGCATCGC TGGCGGAGGC TGACTCAGAG ACGCTGCGTG AGACCATCTC TGAGGCAAAA
GATGCTGCTT CTGAAGCTGC GCTTGCGGTA GAAAAAGAGA AAGACGCTGC TAACCAGATT
AGCGTTGAGA TTGGTAAGCT TGAAGTCCAG GTTCAAAATG CCATTGAGGC CATTCTTGCT
ACAGGCGCTT CCCTTGACGA GGCTTTGACG CTTCCAGAGC CAGAAGATAG AGAGCAGGCA
GAGCGCCTTG CTGCGTCGCT TAAGAGCCAG CTTGAGGCGC TTGGTCCTGT CAACGCTGTT
GCTATGGATG AGTATGAGCG CCTCAAAGAG CGCGCAGATT ACATTAACGA GCAGGTGGCT
GACTTAGAGG CAGCTCGAAC TTCGCTGAAG AAGATTATCT CAGCCATTGA CCGAAAGATG
CGCAGCCGCT TCCTTGTTGT CTTTGACCGC GTTAACAAGA ACTTTTCTGA GATCTTCTCG
ATGCTTTTCC CTGGTGGTCA TGCCCATATT GAGCTTACCG ACCCAGATCA TCTCTCTGAG
ACGGGCATTG AGATTGTGGC TCAGCCGCGC GGTAAGCGCA TTACCAAGAT GATGCTCATG
TCAGGTGGTG AGAAGAGTCT CACTGCTCTG GCATTGCTTT TTGCTGTGTA TAGAACGCGT
ACTGTTCCGT TCTATGTCTT TGATGAGGTT GAGGCTGCGC TCGACGACGC TAACCTCTCT
AAGCTGCTTG ATGCCATTGA GCAGCTCAAA GAGACAACAC AGCTGATTGT TATTTCTCAC
CAGAGGCGCA CTATGGAGCA GGCAGATGTA CTGTATGGTG TATCTATGCA GGCAGATGGT
GTCAGCCACG TTGTCTCTCA GAGGCTTGAT AAGACAACCG GAAAGGTAGT TGATATCTAA
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| Protein sequence | MYLKSLTLKG FKSFADKTQM VFDPGLTVVV GPNGSGKSNV SDAILWVLGE QSAKMLRGQA
MEDVIFSGSS ARGAVGVAEV TLVLDNSDHT IPIDFSEIGI TRRMYRSGES EYLINGAPSR
LMDIQDILHD SGLGKDTHSI ISQGKLDSIL SSRPEQRREL IEEAADISKH RRRKERAERK
ISSMDENLTR AKVVSREITR QLKPLERQVD KASRAKDLSA QLKDLTVQLA VDDLRQLQFA
HSKLEVRAKE AEAAIELAQY RASEKNRELE KLQSLLEQKG LFVGDLGEQR RRMQEILGRM
GSDMRLLEEK GKNMVSRLSD TRMQLSVMDK QKADAAKEKE ELSGQLATIR AKVADLTESV
NTLQEAANQA IAERRALDVK ISDCTASERS ARNTADKETL AYVKLEEQIA HAQVEDQMFE
SRLTQITEAL EIAHAALEDS GIKEAELTTA LDKARQESEA FVAEISERAS ALEAAREAER
TARQELSSSE ATLEALRALD VEVQKGSPLA EKLVSDTATA SLVSGRLADY LEVQPKFEAL
VEQLLGEDLS ALVVDKRQNI HVLFERVQEL SEDGKATLVT FSDVTSSLVA PAHTTPLLEH
VSAQKGAEAL VQELFGHVFV AQSLDDAYIA RKNEPRGLYV LLDGTLLYPD GRLVLGHASR
AEDGSLERKR RIRELEIALP ALKRHLEAAR SAVTNCENEL ASVREKSAQS KGEVARLNGE
LTSIASERGR LEGQVASSQA ELKQVSTSRE QAKERAQEAH THIDEHKRAA EEAKARMESL
ASELKELQDQ HEDAIRAQGR ANRELSDAKT DLTVAKERAT SMVSRQAELE RRLSQLDEQL
VAAKQATHAL EVIRLRVDPL YKRYDALHQK ALEWASRLKD RASLAEADSE TLRETISEAK
DAASEAALAV EKEKDAANQI SVEIGKLEVQ VQNAIEAILA TGASLDEALT LPEPEDREQA
ERLAASLKSQ LEALGPVNAV AMDEYERLKE RADYINEQVA DLEAARTSLK KIISAIDRKM
RSRFLVVFDR VNKNFSEIFS MLFPGGHAHI ELTDPDHLSE TGIEIVAQPR GKRITKMMLM
SGGEKSLTAL ALLFAVYRTR TVPFYVFDEV EAALDDANLS KLLDAIEQLK ETTQLIVISH
QRRTMEQADV LYGVSMQADG VSHVVSQRLD KTTGKVVDI
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