| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0849 |
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| Symbol | |
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| ID | 8413715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 943255 |
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| End bp | 944634 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022432 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003179869 |
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| Protein GI | 257784652 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.265552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA GCCTTCAAGA TAGACTGCAA AATACATTTT CCGCTTTGCG CGGAAAGGGT
CGTCTTACTG AGGACGACAT CAATTCCGCA ATGCGAGAAA TTCGCATGGC TCTTCTCGAG
GCTGACGTTA ACTACAAGGT AGTTAAAGAG TTTGTTGGCC GCTGTAAAGA GCAGTGCATG
ACTGCTGACG TACTGGAGTC CCTGTCTCCA GCTCAAAACG TTGTTCGCAT TGTTTTAGAT
GAGCTGACAG CACTGCTTGG TTCAACTGAA TCAAAGCTTA CGCTGGCACA GAACCGCATT
CCAAACGTCA TTATGCTTGT CGGTCTTCAG GGCTCTGGTA AGACAACCGC AGCTGCAAAG
CTTGCATACT TGCTTAAGTC CCAGGGAAAG AATCCTCTGC TTGCCGCTTG CGACGTTCAT
CGTCCTGCAG CAGCAGATCA GCTTGAAACA CTTGGCTCTG AGATTGGCGT GCCAGTCTAT
CGCGGCGACG GTAAAGACGC TGTTGCCATT GCATCTGAAG CTATCCAGGA GGCCGTTGAT
CATCTCAATG ACCTGGTAAT TGTTGATACT GCTGGTCGTC TTCAAATTGA TGAAGAAATG
ATGGAAGAAG CCGTTGCTAT CAAACGTGCC GTCAAACCAG ATCAGATTCT TATGGTTGTC
GATGCTATGA CCGGCCAGGA TATTGTTAAT GTTGTCAGCA CCTTCGCAGA ACGTGTGGAC
TTTGACGGCG TTATCATGTC CAAGCTTGAT GGTGATGCTC GTGGTGGTGG TGCACTTTCT
GTACGTGAGG TTACCGGTAA GCCTATCAAG TTTGTTTCCA TGGGCGAGAA ACCCGATTCA
CTTGAGGTTT TCCATCCAGA TCGTATGGCC AAGCGTATTC TTGGCATGGG TGATGTCATC
TCTATTGTTG AGCAGGCTCA AAAGGCGGCT GATGAGCAGC AGGTTGAAGA TGCCGAACGT
ATGTTGCGCG AGGGCTTTAC TATGGACGAC CTGCTCAATC AGATGAACCA AATTCGCAAG
ATGGGTGGTC TTGCAAAGCT TATTGGGGCA CTTCCTGGTG GAGACCGCAT GATGGCTCAG
CAGGGTGGTG TAGACGATAG TTCTATGGGA AAGATTGAAG CCATCATTCA TTCAATGACT
AAAGAAGAGC GCGCGCGTCC AAAGATTATT AATGGTCAGC GACGTCGTCG TATTTCTATG
GGTTCTGGTC GTAGCGTTCA AGAAGTTAAT CAGCTTATTC GTCAGTGGGG AGAGATGAAT
AAGATGATGG GTAAAATGAA GGCTATGACT CAGGGCGGTA ATGCAAAGAA GGGTCGTCGT
GCCATGGAGT CTATGATGAA GAATATGGGC TTTGGTGGAG GTCAAATGCC TCGCTTTTAA
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| Protein sequence | MFNSLQDRLQ NTFSALRGKG RLTEDDINSA MREIRMALLE ADVNYKVVKE FVGRCKEQCM
TADVLESLSP AQNVVRIVLD ELTALLGSTE SKLTLAQNRI PNVIMLVGLQ GSGKTTAAAK
LAYLLKSQGK NPLLAACDVH RPAAADQLET LGSEIGVPVY RGDGKDAVAI ASEAIQEAVD
HLNDLVIVDT AGRLQIDEEM MEEAVAIKRA VKPDQILMVV DAMTGQDIVN VVSTFAERVD
FDGVIMSKLD GDARGGGALS VREVTGKPIK FVSMGEKPDS LEVFHPDRMA KRILGMGDVI
SIVEQAQKAA DEQQVEDAER MLREGFTMDD LLNQMNQIRK MGGLAKLIGA LPGGDRMMAQ
QGGVDDSSMG KIEAIIHSMT KEERARPKII NGQRRRRISM GSGRSVQEVN QLIRQWGEMN
KMMGKMKAMT QGGNAKKGRR AMESMMKNMG FGGGQMPRF
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