| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0830 |
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| Symbol | |
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| ID | 8413696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 916111 |
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| End bp | 918750 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022413 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003179850 |
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| Protein GI | 257784633 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.122611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000598475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAAAAA CGCGTGTACA TGACCTTGCC AAAGAATATG GTATGCAGAG CAAGGAATTG
CTTGAGCACC TTGCGGACAT GAAGATCCCT GCAAAGTCTG CTTCTTCTAC GCTTGAAGAT
GCATATGTTT CTATTGTTCG CAAGAAACTC CAACCTATTA TGGAGGCTCG TGCTGCTGAA
ATTGCAGCTC AGAAGGCTGT TGAAGAAGAG GCTGCTGCCA AAGAGGCAAA GGCTGCTGCT
GAGGCAGCAG AGGCTGAGCG ACTTGCCGCA GAGGCAAGGC GTGAAGCTGA GCGTGCAGAA
GAAGAGAAAA AGCGCGCAAA AGAAGAGGCT GCTCGCAAGA AAGAAGAGGA GCGCCGTCGT
GCTGAGGAAG AGAAGAAGCG TCTTGAGGCC GAAGAAGCCG AGCGTAACCG TATAAAGGAC
ACTGCTCCTA AGACTGCTCC TTCTTTTAAT AATCTGCTCG ATCAGATTGC TCAGCAGGAA
GAGGTTTTGA AGCAGCAGGC TGCAGAGTCC GCTGCACAGA AGAAGGCTGA GAAGGGATCC
AGGAACCACG CTCGCGCTAA TGCAAGCGAG GCAAGTGGTG CTTCTGCTCG TCATAATTTT
AAGAATGAGC GTAATGATGC CTCCATGTCC GACGAGCGTC CAAATGGTAA GCGTAGAAAG
AATCGTCGTG GCGGAGATGA CGGAGAAGAT CGTTATAGCC GCATGGCTCG TGAGGCTGAA
GCTTACAACA GAAGTCGCGT TCTTGATGAG GCTCGCGTTG CTATTGAAGA GGCAAGTCGA
GAGTCCTCTG GTCGTCGTAA AAAGCGTAAA GAACGTCGTC AGAAGCAGGC AGCAGAGGCT
GCTATGGAGC AGCGTATTGA GGAAGCACTT GCAAACGACC AGGATATTTC CCAGCTTGAT
ACTGTAAAAG TCCCTCAGGG TTCTACAGTC TCTGAACTTG CCGAGCTTCT TGGCGTTCCT
GCAAATGATA TCATTAAGCG CTTGTTCCTG CTTGGAAATC CTTTAACACT TACAGAGACC
ATGTCTGATG AACTTATTGA GATTGTTGCT GATGACTTGG GCCGCCAGAT TAAGATTATG
TCTAAGGAGG AGGAGAACTC CTTCACTTTC TACGATGATC CTAAGGATTT AAAGCCACGT
CCTCCAGTAG TTACCGTCAT GGGTCACGTT GACCACGGTA AAACATCGCT TCTGGATGCA
ATTCGTCACA CTGGCGTTGC AGCTGGCGAG GCTGGTGGAA TTACTCAGGC AATTGGTGCT
TCTCAGGTTA CTATTAACGG TCGCGAAATT ACTTTCATCG ATACCCCGGG TCACGAGACT
TTTACGGCGA TGCGTGCTCG TGGTGCAAAA GTTACCGATA TTGTTATCTT AATTGTTGCA
GCAGACGATG GTGTTATGCC TCAGACTATT GAGTCTATTA ATCACGCAAA GGCTGCTGGT
GTTCCAATTG TTGTTGCTGT CAACAAGATT GATAAGCCGG GTGCAGATCC TACCCGTGTT
CGTCAGGAGC TTACCGAGTA CGGTGTCATT CCTGAGGAAT GGGGCGGACA GAACATGTTT
GTTGACATTT CTGCCAAGCA GAACTTGGGC ATCGATGATC TTCTTGAGAC TATTATTTTG
CAGGCAGATG TCCTTGAGCT GAAGGCTAAC TCAGACACCT TTGCATCCGG TAATGTTCTT
GAGGCTAAGC TTGACCGTGG TCGTGGCTCT GTTGCTACTG TTTTGGTTAC TCGCGGTACG
CTTCACATCG GCGATGCTCT TGTTGCTGGT ATGGCCTTTG GTCGTGTCCG TGCAATGCTC
GATCCTAAGG GCAATGCGGT GACTACTGCT GGTCCTTCTG ATGCAGTTGA GATTCTTGGT
CTGCAGACCG TTCCTGGTGC AGGCGATGAA TTCCGCGTCT TCCAGGAGGA GCGTGACGCT
CGTGAGCTTG CTGACCAGCG CGCTCTTAAG GCTCGTATCG AAGAGCAGAA CCGTGTTAAG
CACGTTACCC TTGAGAACCT CTTTGATACT ATGGCAGATC GTGACGTCAA GGAGCTCAAC
CTTATTATCA AGGCTGATGT TCAAGGCTCC ATCGAGGCTC TCCAGGACTC CTTGGACAAA
ATGGATCAAT CCGAGGTTCG TATTAGCACC ATTCACTCTG CTGTTGGTGG AATTACCGAG
ACCGACGTTG TTCTCGCTGA TGCATCAAAT GCAATTATCA TTGGCTTTGG TGTCCGTCCA
GATGCAAAGG CTAAGCTTGC TGCAGAGCGC GTAGGCGTTG AGATTAGAAC TTATAGTGTC
ATCTATAAGG CAATCGAAGA GATTGATGCT GCTCGTATTG GTATGCTTAA GCCAACTGAG
CAGGAAGTCC AAACCGGTGT TGCTGAAGTT CGCGATACCT TTAAGGTGCC TAAGGTTGGT
ATTGCTGCAG GTTGCATGAT TTCTGAGGGT GAGATTTCAC GCGACGATAA TATTCGTCTT
ATTCGTGATG GCTTTGTTGT CTACGACGGA AAGATTGCAT CGCTTAGACG CTTCAAAGAT
GACGTTAAGA GCGTTAAATC CGGCTACGAA TGCGGTATCG GCCTTGAGAA CTTCCAGGAC
ATCAAGCCTG GCGACCAGCT TGAAGGCTAT CGTATTGAGC AGGTGGCTCG TACCGAGTAA
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| Protein sequence | MAKTRVHDLA KEYGMQSKEL LEHLADMKIP AKSASSTLED AYVSIVRKKL QPIMEARAAE
IAAQKAVEEE AAAKEAKAAA EAAEAERLAA EARREAERAE EEKKRAKEEA ARKKEEERRR
AEEEKKRLEA EEAERNRIKD TAPKTAPSFN NLLDQIAQQE EVLKQQAAES AAQKKAEKGS
RNHARANASE ASGASARHNF KNERNDASMS DERPNGKRRK NRRGGDDGED RYSRMAREAE
AYNRSRVLDE ARVAIEEASR ESSGRRKKRK ERRQKQAAEA AMEQRIEEAL ANDQDISQLD
TVKVPQGSTV SELAELLGVP ANDIIKRLFL LGNPLTLTET MSDELIEIVA DDLGRQIKIM
SKEEENSFTF YDDPKDLKPR PPVVTVMGHV DHGKTSLLDA IRHTGVAAGE AGGITQAIGA
SQVTINGREI TFIDTPGHET FTAMRARGAK VTDIVILIVA ADDGVMPQTI ESINHAKAAG
VPIVVAVNKI DKPGADPTRV RQELTEYGVI PEEWGGQNMF VDISAKQNLG IDDLLETIIL
QADVLELKAN SDTFASGNVL EAKLDRGRGS VATVLVTRGT LHIGDALVAG MAFGRVRAML
DPKGNAVTTA GPSDAVEILG LQTVPGAGDE FRVFQEERDA RELADQRALK ARIEEQNRVK
HVTLENLFDT MADRDVKELN LIIKADVQGS IEALQDSLDK MDQSEVRIST IHSAVGGITE
TDVVLADASN AIIIGFGVRP DAKAKLAAER VGVEIRTYSV IYKAIEEIDA ARIGMLKPTE
QEVQTGVAEV RDTFKVPKVG IAAGCMISEG EISRDDNIRL IRDGFVVYDG KIASLRRFKD
DVKSVKSGYE CGIGLENFQD IKPGDQLEGY RIEQVARTE
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