| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0817 |
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| Symbol | |
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| ID | 8413682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 898343 |
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| End bp | 899371 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022399 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003179837 |
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| Protein GI | 257784620 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.533751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.134467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCGCT CGCATAGTTC TAGCTCAAAT AAACGCTCTG TTTCAATGGC TGATGTTGCA
CAAGTTGCTG GCGTTTCTCA GCAGACCGTC TCTCGTGTTG CTAATGGTGC CCAGAACGTT
AGCAAAGCAA CGCGTGAAAA AGTTCAAGCC GCAATGGAGT CTATGGGCTT TAGGCCAAGC
TTTGCTGGTA GGTCATTGAG GTCTGGCTTG TATCAATCAG TGGGACTTTG TCTGTATGAC
ATTCGCGAGT TTGGTAACTT AGCTACTCTC GACGGCATTG TTTCGGCTGC TCGTGATCAT
GAATATGCAA TTACGATGAT TGAGAAGGGT TCTGGCGACG GCTTATGCCT TCAGGATATT
TCTCATCGCA TGTCTAATCT TCCCGTTGAT GGCATGATTA TTAGTATGAG TCTTATGGCG
TCAGACTTTG AATCTTTTGT ACCACAACCA GGTCTTGGAA CAGTTCTTCT TACCATGCAT
GAGCATCCTT ACTGTACCAC TGTTGATTCT GATCAGTATG GCTGCTCAAA GCTTGTCATT
GACCATCTCT TTGAACTTGG GCATCGCAAA ATCCGTTTTG TAGCAGGTCC CTCATACTCT
ATTGACTCAC AATTTCGCGA GAAGGGCTGG CGAGATGCAA TGTCTGAGTA TGGGTTGGAA
ATTGTCGAGC CATTTGCTGG TGACTGGACT GCTAATAGTG GCTATGAAAT TGGTAAAAAG
TTGCGAGAAA ATCGCGATTA TACGGCAGTG TATGTTGCAA ACGATCAGAT GGCACTTGGT
GTCATTGCGG CATTTGAAGA AGTTGGACTG AGCGTTCCAG ATGATGTCAG CGTTGTTGGT
GTTGACGACT CTCTTGAAAA TTATTTGCCT AACTTCTCAT TAACCACAGT TCGCTTTAAC
CTACTAGAGC GCGGACGTGT TGCACTTGAG CATGCAATTC GTGCATCTGA GCCTGGATAT
AAACCCGAAG CAATCAGAAT TGCTCCAAAG CTCATTGTTC GTACTACCAC AGCAGCACCA
CAGAAGTAG
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| Protein sequence | MTRSHSSSSN KRSVSMADVA QVAGVSQQTV SRVANGAQNV SKATREKVQA AMESMGFRPS
FAGRSLRSGL YQSVGLCLYD IREFGNLATL DGIVSAARDH EYAITMIEKG SGDGLCLQDI
SHRMSNLPVD GMIISMSLMA SDFESFVPQP GLGTVLLTMH EHPYCTTVDS DQYGCSKLVI
DHLFELGHRK IRFVAGPSYS IDSQFREKGW RDAMSEYGLE IVEPFAGDWT ANSGYEIGKK
LRENRDYTAV YVANDQMALG VIAAFEEVGL SVPDDVSVVG VDDSLENYLP NFSLTTVRFN
LLERGRVALE HAIRASEPGY KPEAIRIAPK LIVRTTTAAP QK
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