| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0816 |
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| Symbol | |
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| ID | 8413681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 897163 |
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| End bp | 897927 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022398 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179836 |
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| Protein GI | 257784619 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.067607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.131733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAT CACTTCCTTC TGAAGATGCA GAAACTGTTG TTGCGGTAAA TGGTGTTTCG
GAGATTTTTA ATATTGCTTC GGAGCAGTTT AACTCGCTGA AAGAGTATTT TATTGCCTTT
GCACGCGGCG AGGTTGCCTT CAAGGAATTC AAAGCTCTTG ATGACATCTC GTTTGAGGTT
AAGCGCGGCG AGGCTTTTGG TTTGGTGGGC ACCAATGGTT CCGGCAAGTC TACCATGCTT
AAAATCATTG CTGGTGTACT TGAGCCTTCT AAGGGAACTT GCGAGGTCAA AGGTACTATT
GCACCGCTTA TTGAGCTTGG CGCAGGTTTT GACATGGAGC TAACCGCTAA AGAGAATATC
TACCTTAACG GTGCTCTTCT TGGTTACAAA AAGGAATTTA TTGACTCGCA CTTTGATCAG
ATTGTTGAGT TTGCTGAGCT TGAGGGTTTT ATGGATATGC CACTCAAGAA TTACTCGTCG
GGTATGGTGG CACGTATTGC TTTTGCAATT GCTACGGTCA CAGAACCCGA TCTGCTCATT
GTTGATGAGA CACTCTCGGT AGGAGATTTC CTCTTCCAGC AAAAGTGCGA GAATCGTATC
AAAGAGCTGG TTGCTTCGAA TAATGTTACG GTTCTTCTGG TTTCTCACTC CATTGACCTG
GTTCAGCGCA TTTGTGATCG TGCTATTTGG ATTGAGAAGG GTAAGCAGCG CATGCTTGGT
CCTGTAGATG AAGTTTGTGA AGCTTACGAG CATCTCAAGA GATAA
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| Protein sequence | MRPSLPSEDA ETVVAVNGVS EIFNIASEQF NSLKEYFIAF ARGEVAFKEF KALDDISFEV
KRGEAFGLVG TNGSGKSTML KIIAGVLEPS KGTCEVKGTI APLIELGAGF DMELTAKENI
YLNGALLGYK KEFIDSHFDQ IVEFAELEGF MDMPLKNYSS GMVARIAFAI ATVTEPDLLI
VDETLSVGDF LFQQKCENRI KELVASNNVT VLLVSHSIDL VQRICDRAIW IEKGKQRMLG
PVDEVCEAYE HLKR
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