| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0805 |
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| Symbol | |
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| ID | 8413670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 888166 |
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| End bp | 888918 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022387 |
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| Product | competence protein ComEA helix-hairpin-helix repeat protein |
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| Protein accession | YP_003179825 |
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| Protein GI | 257784608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.300188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.889784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCAGA TTTCAAATAA TCGTTACCAA TTAATTAATA AATTGATGAG AAGATTTAAT
CTTTCTCAGC AGCAACTTTT AGCGGTTATT GCTGTGGTTG TCCTAGGCAT TGTTTCAGTA
GTTGTATTTA TTGGGATGAT TAGCGCTGGA ACATCAGAGT CTTTTGACAG ATCACATAAT
CAAGCAAACT CTACACAGGG AGCGATTGTT GCGGAAAACC CACAGCACTC GCAGGAGGAT
AAGACTACAG AGCAGCCAGG AGATGACCAT AAGATTAAAG AAGCATCTCC TCAAATGATG
GTTCATGTTG ATGGAGCTGT TAAATCACCT GGTCTTTATG CACTTCAGAC GGTAAATCCA
CGTGTAAACG ACGCAATTCA AATAGCAGGT GGCTTGACTG AAGATGCCAA CAGTCAAGAC
ATTAATCTAG CGTCTCCTGT AGAAGATGGT CAAAAAATTT ATATTCCTCG AAAGGGAGAA
GAGGCGCCGC CAGAGATTTT GCAGCCAGAT CAAAATAAAG CCACGAGCAA TAAGCAGACA
GATAAGAAGA GCGACAAAAA GACAGTTGTA GATATTAATC GAGCAACCGT AGAAGAATTT
ACCAAACTCA AAGGTGTTGG CGAAGGATTG GCTAAGCGCA TTGTTGCAGA CAGACAAAAG
AATGGACCCT TTAAGACTAC TGAAGATTTG ATGCGCGTTT CTGGTATTGG TCAGAAAAAA
TTTGATCAGC TTAAGGACAA TATTCGTGTC TAA
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| Protein sequence | MAQISNNRYQ LINKLMRRFN LSQQQLLAVI AVVVLGIVSV VVFIGMISAG TSESFDRSHN
QANSTQGAIV AENPQHSQED KTTEQPGDDH KIKEASPQMM VHVDGAVKSP GLYALQTVNP
RVNDAIQIAG GLTEDANSQD INLASPVEDG QKIYIPRKGE EAPPEILQPD QNKATSNKQT
DKKSDKKTVV DINRATVEEF TKLKGVGEGL AKRIVADRQK NGPFKTTEDL MRVSGIGQKK
FDQLKDNIRV
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