| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0799 |
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| Symbol | |
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| ID | 8413664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 880218 |
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| End bp | 881465 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022381 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_003179819 |
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| Protein GI | 257784602 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCT GGCAGTTTAA ATATAATCAA GCGGCTGTTT CTGCACTTTA CCTGCATATC
CCATTTTGCT CGCAAAAATG TTTCTATTGC GATTTTTCTT CTTGGTCTAC AAGACAAGAT
GACAGTCGTA TGAAAAAGTA TGTAAATGCT TTAAAACATC AGTTAGACGA AGCTGCTCAA
CTGGGTATAC TCGCAACTAC AAAAACAGTT TATATGGGCG GTGGAACTCC CAGCTTACTT
GATCAGGGTG CGGTTGATCT GGCGCATCAT ACCTCATCTA TTACACATCC TATTGAATTT
AGTATGGAAG CAAATCCAGA CTCACTATCT GACGAACTTC TCGCTAGTCT TTCTGCAGGA
GGAGTAACGA GAATTTCTTT GGGAGTTCAG AGCTTTAATG ATAATGAGCT TAAGGAGCTT
GGTAGAATTC ATTCAGCTGA TCTGGCATAC GATAGAGTTT TAGCTGCAAA AGAGAGCGGC
TACGAAGTGT CGGTTGATCT CATGTGCGCT ATTCCTGAGC AAACAGAGAG TTCTTGGGAA
TATACGCTTT CAAGGTTTAT CTCGCTTGGG GTAAATCATG TGAGTGTTTA TCCACTTACC
ATTGAAGATG GCACGGCACT AGCTAAGCAA ACCCAAGATA AAGACATTCC ATGGAATGTT
TATGACGTGC AGGCAGATCG AATGCAAACG GCTTCAAAGA TGCTTCAAGC AGCAGGATTT
GAGCGTTACG AGGTGGCAAG TTATGCTCGT AATCAGAAAA GTTGCAAGCA TAATAAGATG
TACTGGACAG GTGAGTCGTA TCTTGGTCTA GGTACTAGTG CTGCAAGTAT GTTGACAGCT
TTTGAGTATG ATGCTCTGGC AAAGGAAAAC GCTTTTTTGC CTTCGAGACC ACAAGATGCT
ATCCGTGTGC GACTTGTGGT GCTTGATTCT CCAAAAAAAA TTGCTGAAGG CATATCGCTT
TTCTCGACAG AGTTTGACGT TGAATTTTTG ACCTACAGAG AAGCTGTGGC AGAAGATTTG
ATGCTCCATG CACGCCTCAC AGAGCTAATT GCGCCTGCGC TTTTGGATGA GTCTGAGCAG
GTATTTGGTG CATTAACTTT ACAAGAAGTG TTTGATGCCT GTGTACAAGA TGAGTTACTA
GAATGCGTTG ATGCAGCAGA TTCTGAGATT AAGGCTTCAT ATAGGCCTAC CAAGAAGGGC
TGGCTGCTTG GAAACGAGCT TTATGGCCGT TTTTGGGAGT TAAGATAA
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| Protein sequence | MNSWQFKYNQ AAVSALYLHI PFCSQKCFYC DFSSWSTRQD DSRMKKYVNA LKHQLDEAAQ
LGILATTKTV YMGGGTPSLL DQGAVDLAHH TSSITHPIEF SMEANPDSLS DELLASLSAG
GVTRISLGVQ SFNDNELKEL GRIHSADLAY DRVLAAKESG YEVSVDLMCA IPEQTESSWE
YTLSRFISLG VNHVSVYPLT IEDGTALAKQ TQDKDIPWNV YDVQADRMQT ASKMLQAAGF
ERYEVASYAR NQKSCKHNKM YWTGESYLGL GTSAASMLTA FEYDALAKEN AFLPSRPQDA
IRVRLVVLDS PKKIAEGISL FSTEFDVEFL TYREAVAEDL MLHARLTELI APALLDESEQ
VFGALTLQEV FDACVQDELL ECVDAADSEI KASYRPTKKG WLLGNELYGR FWELR
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