| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0796 |
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| Symbol | |
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| ID | 8413661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 876992 |
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| End bp | 878185 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022378 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_003179816 |
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| Protein GI | 257784599 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.751342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAGA AGAAAGACTT CTACGAGCTC TTAGGTGTTG CTCATGATGC AGATCAAAAA
ACTATCAAGC GTGCTTTTTT AAAGCTTGCA AGAAAGCTGC ACCCTGATGT TTCTGATGAC
CCTCATTCAG AAGAGAAATT TAAAGAGATA AACGAAGCAT ATTCTGTACT TTCAGATGAG
CAAAAGCGTG CTAACTATGA CCGTTATGGT GACCCTAATG GTCCATCCGG TTTTGGCGGC
GGCTATGTGG ATATGTCAGA TATTTTTGGT GGCGGCTTCG GCGGCTTTGG AGATATCTTT
GATACTTTCT TTGGCGGCGG TCATGGCGGT CGAGGCGCTG CTCAGCGTAC TCGTGGTAGT
GATATGGGAA TTAGACTCTC TATCACTTTG GAAGAAGCTG CTGCTGGTGT TACAAAAACT
ATCTCTTATA ACAGACTTTC TACCTGCGAT GACTGTAACG GTACAGGTCT TGGTGAGGGT
GGAAAGATTG AGGACTGCCC ACGCTGTCAT GGTACAGGTA CTGTAGTTCA GGTCCAAAAT
ACCGTCTTTG GTCAAATGCA GTCCCAAACC GTTTGTCCAG AGTGCCAAGG AACGGGCAAG
AAAGTTGAAC ATGCTTGTGA GACCTGTGGA GGTCAGGGAA GAACTCCTGA TCATGAGCGT
GTTTCTGTTG AAATTCCCGC AGGTGTTCAT TCAGGTCAAT CAATTTCTAT TACTGGTAAA
GGCGAAGCAG GTGTTAGAGG CGAAACCTCT GGTGACCTTA TCGTAACCAT TGAGGTTGCT
CAACATAAAG ACTTTGAGCG CAGGGGCGAT GACCTTTTTA CTTCAGTTAG CGTAGTTTCT
CTTGAGGCAA TTGTTGGTAC CACCGTTACT ATTGACGGCA TTATCAAAGA TGAATCTATT
GAAATTTCTA TCCCTGCAGG TTGTAAGTAT GGTCAGCAGC TGAGTGTAGC TGGTAAGGGT
ATGCCTCGTT TGCATTCTAA GGCTCGTGGA AACCTTTACG TTCTGGTTCA CATTGAGACT
TCAACTGGTT TAACCACAGA TCAATTAGAG ATGCTCACTG CTCTTATTGA TGAGCGCAAA
CAAAATTCGG CTCAAGAAAC TCAAGATAAT CAGCACGGTA ATCAATCTTC AGCAAAAGAT
TTCACAGCTG ATAAAGACAA GAATGCTAAA AAGGCTTCCA AGAAGAGGCA CTAA
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| Protein sequence | MSEKKDFYEL LGVAHDADQK TIKRAFLKLA RKLHPDVSDD PHSEEKFKEI NEAYSVLSDE
QKRANYDRYG DPNGPSGFGG GYVDMSDIFG GGFGGFGDIF DTFFGGGHGG RGAAQRTRGS
DMGIRLSITL EEAAAGVTKT ISYNRLSTCD DCNGTGLGEG GKIEDCPRCH GTGTVVQVQN
TVFGQMQSQT VCPECQGTGK KVEHACETCG GQGRTPDHER VSVEIPAGVH SGQSISITGK
GEAGVRGETS GDLIVTIEVA QHKDFERRGD DLFTSVSVVS LEAIVGTTVT IDGIIKDESI
EISIPAGCKY GQQLSVAGKG MPRLHSKARG NLYVLVHIET STGLTTDQLE MLTALIDERK
QNSAQETQDN QHGNQSSAKD FTADKDKNAK KASKKRH
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