| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0788 |
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| Symbol | |
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| ID | 8413653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 869462 |
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| End bp | 871660 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022370 |
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| Product | Polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_003179808 |
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| Protein GI | 257784591 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000677019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.144869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAG TAACTCACGA ATTTGACCTC TATGGTAAGC ACTACACCCT TGAGGCTGGT
GAGCTCGCAA AGCAGGCAAC AGGTGCCTGT ATCGTTAAAT GTGGTGATTC CACCGTACTT
CTCACTGCAG TGGTTTCCAA GGAGCGTAAG GATTATGACT TCTTCCCACT GACTGTTGAT
TTTATTGAGA AAATGTATGC AGTTGGCCGT GTCCCTGGTG GATACCTCAA GCGTGAGGCT
CGTCCATCCG AGAAAGCAAC GCTTACTGCT CGTATGATTG ACCGTCCTCT GCGTCCTTCT
TTCCCAGAAG GCTTCCGCAA TGAGGTTCAA ATTGTCGCAA CCTCTCTTGT TGCTGATCAG
GTGAATGCTG TTGACACCAT CTCTGTCATG GGCGCATCTG CTGCTCTAGC TGTCGGTGGC
GTTCCATTTG AGGGTCCACT TGCTTGTGTT CGTATTGGTC GAAACGCTGA TACCGGTGAG
TTCCTGGTTA ACCCAACCTA TGAAGAGCGT GATCACTCTG ATCTTGACCT CGAGCTTGGC
GGTTCTTCCA CTTTTATTTC TATGCTTGAG GCTGGCGCAG ATGAGATTTC CGAAGAGGAT
ATGCTTTCTG CTATGGCATT TGGCCAGGAG GCAATTGCAG CTTTCTGCGA GGAGCAGAAG
AAGTTTATTG CTAAGTGGGA AGAGGTTAAC GGCCCAATTG TTAAGCGTGA GTATATTCTT
GACGAGCCAA TCGCTGAGGT TCACGACCGT ATCTTTGCTT ACTACGATCA GATGAGCGCT
GCTCTTAAGG ATGCTGACAA GCAATCCCGT ATGCAGAAGG TTGCTGACTT GATGGATGAG
ATCAAGGCTC AGTTTACCGA GGAGGAGCAG GAGCTTTGGA GCCGCGCTAT TGCAGTTGAG
CTCAAGGCTC TTGAGAAACA CGCAATGCGC GTTATGGTTG TTGAGACTGG CGAGCGCGTT
GACGGTCGTG TGGCTAATGA GATTCGTCCA ATTATGGTTA AGCCTGATTA TCTGCCACTT
GTTCACGGTT CTGGTCTTTT CCAGCGTGGG CAGACTCAGG TTCTTTCCAT CTGTACGCTT
GGCATGCTCA ACGAGTGGCA GCGTCTTGAT ACCATTGAGC CAATGGATGG TAAGCGCTAC
ATTCACCACT ACAATTTCCC ACCATTCTGC ACTGGTGAGA CTGGTCGTAT GGGCAGCCCA
AAGCGTCGTG AGATTGGTCA CGGTGCTCTT GCAGAGCGCG CACTTCTTCC TGTCATTCCT
TCCGAGGAAG AGTTCCCATA CACCATCCGC GTTGTCTCTG AGGTAATGGA GTCCAACGGT
TCTTCTTCCA TGGCTTCTAC CTGTGGTTCT ACGCTTTCCC TTATGGATGC AGGTGTTCCT
CTAAAGCGTC CTGTTTCTGG TGTTGCAATG GGTCTTATTC AGGAGAACGG CAAGACTGTT
GTTCTTACCG ACATCCAGGG TCTTGAAGAC TTCCTCGGCG ACATGGACTT TAAGGTCTGT
GGTACTACCA AGGGAATTAC TGCAATGCAG ATGGATAATA AGGCAACTGG CCTTACTCCT
GAGATTTTAC GTAATGCATT AATGCAGGCT CACGAGGGTC GCATGTTCAT TCTGAACAAG
ATGCTTGAGC AGATTCCTGC ACCTCGTACA GAGACTAAAG AGACCGCTCC TCAGATTATC
TCGCTTTCTA TTCCAATCGA TAAGATTCGT GACGTCATCG GTTCTGGTGG CAAGGTTATT
CGTGGCATCC AGGAGGATAC AGGTGCAACT GTTGATATTC AGGAGGATGG CACCGTCTTT
ATCGCTGGTA CTAACGGTGC TGCTGAGGCT GCCGCAGAGC GCATCAAGGC TATCGTTAAG
GTTCCAGAGG TAGGCGAGGA GTACACCGGT CGCGTTGTTG GTCTTCAGCC ATTCGGCGCC
TTTGTTGAGC TTCTTCCTGG TAAAGATGGC CTGCTCCATA TTTCTCGCGT AGCACAAGGA
CGTGTCGAGA AGATCGAGGA TGTTCTGGCT ATTGGTGACG AGGTTAAGGT TAAGGTTCTT
GAGGTAGACG AGAAGGGCAA GATTTCTCTT GACCGTCTTG ATAAGCCTGA GGCACCGCAG
GGTGCTTCAA AGAAGGACCG TGAGGAGCAC CGCTCACGTC GTCAGAACGA TACTGGCAGC
TCCGAGCGTA GACAACCACG CCGTCATCAC GACGCATAA
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| Protein sequence | MTKVTHEFDL YGKHYTLEAG ELAKQATGAC IVKCGDSTVL LTAVVSKERK DYDFFPLTVD
FIEKMYAVGR VPGGYLKREA RPSEKATLTA RMIDRPLRPS FPEGFRNEVQ IVATSLVADQ
VNAVDTISVM GASAALAVGG VPFEGPLACV RIGRNADTGE FLVNPTYEER DHSDLDLELG
GSSTFISMLE AGADEISEED MLSAMAFGQE AIAAFCEEQK KFIAKWEEVN GPIVKREYIL
DEPIAEVHDR IFAYYDQMSA ALKDADKQSR MQKVADLMDE IKAQFTEEEQ ELWSRAIAVE
LKALEKHAMR VMVVETGERV DGRVANEIRP IMVKPDYLPL VHGSGLFQRG QTQVLSICTL
GMLNEWQRLD TIEPMDGKRY IHHYNFPPFC TGETGRMGSP KRREIGHGAL AERALLPVIP
SEEEFPYTIR VVSEVMESNG SSSMASTCGS TLSLMDAGVP LKRPVSGVAM GLIQENGKTV
VLTDIQGLED FLGDMDFKVC GTTKGITAMQ MDNKATGLTP EILRNALMQA HEGRMFILNK
MLEQIPAPRT ETKETAPQII SLSIPIDKIR DVIGSGGKVI RGIQEDTGAT VDIQEDGTVF
IAGTNGAAEA AAERIKAIVK VPEVGEEYTG RVVGLQPFGA FVELLPGKDG LLHISRVAQG
RVEKIEDVLA IGDEVKVKVL EVDEKGKISL DRLDKPEAPQ GASKKDREEH RSRRQNDTGS
SERRQPRRHH DA
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