| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0785 |
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| Symbol | |
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| ID | 8413650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 863540 |
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| End bp | 865045 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022367 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003179805 |
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| Protein GI | 257784588 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0234796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.197603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCC CTCGTTTTAG TGAGATGCTC GTAGAACGTC GACGTCAACT CGGACTTTCT
ATCGCTCAAG CATCAAAGAT TCTTCGTCTT AAGGAGCAGG CACTCATTGC TTTTGAGGAA
GGTGATTTCA AGAACATGCC TCAGAGTGGC TATGCTCAAG GCATGCTTTC TTCGTATGCT
CGTTATTTGG GATTAAATCC GCGTGAGATT GTAGATTTGT TTCAAGAAGA GAGCTACGAG
TTTGAAAATG GCACTTATTC TCATGAGTTG CGTCGTCGCA CCCGTGATAC CCAGTCTGGC
CGTGGAATTG CAGGATATGA CGTTATAAAT GAGTCTGAAA GTAGGCCAAA GGCATACGTA
CAGTATCACG GTCTTCTCCC TACATCGGGA GGACCAGCTG GCGATATGGG TGCATTTGCA
ACTACGTCCG GTGTTCGCTC TAGACAAACG GGTGTACCTT TGGGCGCTCA GGCATCTGAA
GAGGATGCCG GCGGCTACTC GTATTCTCGC TATGCCACCG GTCATGCCTA CAATGCAGGT
ATTGAAGAAG CCTCTCGTCA GAAGACTATG GCAAGTCGTA CGCGCGGTGG CGTTCAACGT
AGGCGCGTTG GTATTGCTGG CGTAAGTATG CCAGCTTATA AAGACGATGT AACTAGAAGA
ACTGTTGCTC CAAGTGATTA CACTGATGAC CTTCGCTATG ACAACGTAAC CGCTCCTTAT
GAGCGCGCTT CAACTATCTC TGGTCGTCGT GGTTCTAGAA ATATTGCACA GGTTGACAGG
CCTAACGTTC GCCGTCGTCA GTCTTCTAGC ACAGGTAATC AGCAGCGTCG TGCTCCTCAA
AGATCAGGCG TTATGGGTGC ACTTCAGAAC TACTTCTCTG ATACAGGTCG TACTGTTGCA
ACTGTGTTTG CTCTTGTTGT AATTATCATC ACCGCTGTTT TACTGTATAG CGTTCGCTCT
TGTATGACTG CTCGAACTAC GCCTACTACT ACAAAGACGG TAAGCGTTAA TAATTCAACA
AATGATTCTT CTAAGAATTC CACTACCACA AATAGCAATA CGGATACTTC TAAGAAGGAT
TCTACAGATG CTTCTAAGAG CACCACTACA ACCGAGTCTA AAAAAGAAGA GACTCCTAAA
CAGACTACCG TTGTAGTTAC TGTTGCAGAT GGTCAGACCA GCTGGGTTGA GATTACTGTT
GACGGCAAGA GCGTCGAGGC TGATGCAATT ACTGGTCCAT GGTCTCAGAC GTATACCGTT
ACGGATTCCA TGAGCGTTCT TGCAGGCACT CCTGGTGCTG TTGCTGTTAC CGTTAACGGT
ACTGCTAAAC CATTTGATGC AAATGCTTCT GGTATTGGTA CCTTGACCAT TCAGGGTACT
AAGTCTGCTG ATGCTAATGG AACTAACGCA TCTGGAGCTC AAACAAACAG CACGACATCA
AGTACTACCA GTGGAACTTC TGGCACAACT AATAATCAGA ATTCCAACAG TAATACAAGC
AACTAA
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| Protein sequence | MPRPRFSEML VERRRQLGLS IAQASKILRL KEQALIAFEE GDFKNMPQSG YAQGMLSSYA
RYLGLNPREI VDLFQEESYE FENGTYSHEL RRRTRDTQSG RGIAGYDVIN ESESRPKAYV
QYHGLLPTSG GPAGDMGAFA TTSGVRSRQT GVPLGAQASE EDAGGYSYSR YATGHAYNAG
IEEASRQKTM ASRTRGGVQR RRVGIAGVSM PAYKDDVTRR TVAPSDYTDD LRYDNVTAPY
ERASTISGRR GSRNIAQVDR PNVRRRQSSS TGNQQRRAPQ RSGVMGALQN YFSDTGRTVA
TVFALVVIII TAVLLYSVRS CMTARTTPTT TKTVSVNNST NDSSKNSTTT NSNTDTSKKD
STDASKSTTT TESKKEETPK QTTVVVTVAD GQTSWVEITV DGKSVEADAI TGPWSQTYTV
TDSMSVLAGT PGAVAVTVNG TAKPFDANAS GIGTLTIQGT KSADANGTNA SGAQTNSTTS
STTSGTSGTT NNQNSNSNTS N
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