| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0781 |
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| Symbol | |
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| ID | 8413646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 860407 |
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| End bp | 860904 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022363 |
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| Product | CinA domain protein |
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| Protein accession | YP_003179801 |
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| Protein GI | 257784584 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000616829 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0277412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTCAT CTGAAGTTCT TTCAGAAGCT CAACAGGTTG TTTCAGAGGC TCTTGCGGCT
GGTCTTACGG TGGCTTCTGC TGAGTCTTGT ACAGGAGGTC TTGTTGCAGG TGCTCTTACG
GCAATCTCGG GGTCATCGAG CGTGCTTAAA GGCTCTGTTG TAAGCTATAC CATTGAGATT
AAGCAAAAGG TACTTGGCGT ATCAAAAGAT ATTTTTGATG ATCCATCCCT TGGTGCTGTT
TCTGAGCCCT GCGCAGCGCA GATGGCTTTA GGTGTTAGAG AGGTTATTGG CTCAGATATT
GCAGTTTCCG TTACAGGAAT AGCTGGCCCA ACAGGAGAAG AGCCTGGTAA ACCAGTTGGA
ACAGTTTGGT TTGGCATTAA CAGCAAAAAC TTTACCCATA CGGTCTGTAA ACATTTTTCT
GGTAATAGGG AACAGGTGCG AGAAGCTGCT GTTTTGCAGG CTTTGCAATT AATTCATGAA
GCAATTGTGA AGGCTTAA
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| Protein sequence | MFSSEVLSEA QQVVSEALAA GLTVASAESC TGGLVAGALT AISGSSSVLK GSVVSYTIEI
KQKVLGVSKD IFDDPSLGAV SEPCAAQMAL GVREVIGSDI AVSVTGIAGP TGEEPGKPVG
TVWFGINSKN FTHTVCKHFS GNREQVREAA VLQALQLIHE AIVKA
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