| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0778 |
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| Symbol | |
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| ID | 8413643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 858413 |
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| End bp | 859087 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645022360 |
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| Product | regulatory protein RecX |
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| Protein accession | YP_003179798 |
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| Protein GI | 257784581 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000705154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0273831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAAA TTTCTTGGAC AATTGAGCCT CCACAAAAGA AACAAGCAGT TCTAGGCCAG
GCAAAGCCTA AGGCAAAGAT AATTTTAGAA ACTGAAGTTG GAGGGACGGA GGAATTCTTT
GTCCCTCCAA CAGTAGCCCG CGTTCTTCAG GGCAAAGAGA AAGATGGTGT TTTTACGCCT
TCTTCTCGTA ATGAGTTTTT GTATGAGTTA AAAGAGATTT CAACGCAGTG CATTAAAGCT
CGCATTGAGA CTTTGATTGT AAAAAGGGAT TACTCTACAG CTGAGCTTCA GAAAAAACTC
ATGCTCGATG GTTATCAGAA GAATGTAAGA GACGCTGCAG TACAGAGAGC TGTTGAAGTT
GGCTTAGTTA ATGACAGTCG TTTTGCAGAT GTCTATATAC GATCTAAAAT TTCGCAAGGA
TGGGGTCCTC TTAAAATTAA AACCGAGATT TCAAAAAAAG GAATTGAAGT TGAGAAGCTT
TCTGGGTGGC CTGATTCTTA TTTTTCTGAT GTGGATGAAA TTGAAGTTGC GTATTCTCTA
GCCCAAAGAA AACACCTGTC TGGAAAAAAT GATTATGAGA AACTTGTGAG GTTTCTTGCT
GCAAGGGGAT ATTCATTTTC TATAGCTTCA TTAGTTGCTA AAAAAATCTT AGATGAAAAC
GCCACATCTA AGTAA
|
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| Protein sequence | MSEISWTIEP PQKKQAVLGQ AKPKAKIILE TEVGGTEEFF VPPTVARVLQ GKEKDGVFTP
SSRNEFLYEL KEISTQCIKA RIETLIVKRD YSTAELQKKL MLDGYQKNVR DAAVQRAVEV
GLVNDSRFAD VYIRSKISQG WGPLKIKTEI SKKGIEVEKL SGWPDSYFSD VDEIEVAYSL
AQRKHLSGKN DYEKLVRFLA ARGYSFSIAS LVAKKILDEN ATSK
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