| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0772 |
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| Symbol | |
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| ID | 8413637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 851437 |
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| End bp | 852750 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022354 |
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| Product | GTP-binding proten HflX |
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| Protein accession | YP_003179792 |
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| Protein GI | 257784575 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2262] GTPases |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.426006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.338027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCGAT TTGTTCCATT TTCAACTGCT CCAAAAGTCG AACGCGCAAT TCTTGTAGGC
GTTGATCACG GTAAAAGCGA TTGGTCACTT GAAGAATCAA TGGACGAGTT GGAACGACTG
ACGCAAACTG ATGGCGCTGA AGTCTTTATG CGTATTACGC AGAAACTTGA TGCCCCTGTG
CCTAAGACAT TTATTGGTAA AGGTAAAACA GAAGAGCTTG TTTCTCTTGT GAAAAACACT
GATGCTGATG TGGTCATTTT TGATGATGAA CTTACACCTT CTCAGCAATC TAATTTAGAG
AAACTGCTTG GTGAACCGGT TAAAGTTATT GACCGTACAG CACTTATTCT TGATATCTTT
GGTATTCACG CTCGCACTAA AGAAGGGCGA CTTCAGGTAC AGCTTGCTCA GCTCCAGTAC
GTACTTCCAA GGCTTCGTGG CATGTGGAGT CATCTTGTGG GAGAGCAAAC CCGCGGTGGT
ATTGGTAGTC GTTTTGGTCA GGGTGAAAGT CAGCTTGAGG TTGACCGTCG TCTTATAAGA
AAGCGCATTT CAACTCTTAA AAATGAGCTT AAACAGCTTG GCCAAAGGCG AGAAATTCAG
TCTAAGTCTA GATGGAATTC TGGCACTTTC AGCGTTTCAC TTGTTGGTTA TACCAATGCA
GGTAAATCTA CGCTTCTGAA TCAGCTAACT GGTGCAGATG TATATGCAAA AGATGAACTC
TTTGCAACAC TTGATCCAAC TACCAGGGCA TTATCTCTTG ATGAGGGTAG AAAAATTGTT
CTTACAGATA CCGTTGGATT TATTCAAAAG CTTCCAACAA ATCTGATTGA GTCTTTTAAA
TCTACGCTGA TAGAGGCTCA GGAGGCAGAT CTTTTGCTGT TGGTTGCTGA TGCAACAGAT
AAGAATCTTT CTAAAGAAAT TGCAGTTGTT CGTAGTATCT TGAAAGATAT CGAAGCCGAT
AAAAGCGATC AGGTTCTTGT ATTAAACAAG GTTGATCTTC TCTCTGAGCA AGAACTTCAA
ATGCTTAAGG CGCTTTATCC AGATGCTGTG TTTATTTCTG CTCAGAAAGG CACAGGCATT
AATGGTCTTC TCCACAAAAT TCAAGAGATA GCTAGTACCG GTGATAAGGT TGTTAGTGCT
CTTATTCCAT TTAATAAGGG TGCTCTTGTT AAATCAGTTC ACGAGAGATG TCAACTTTTA
CATGAGCAAT ATGTTGCTGA GGGACTTTTA CTATCAGTTA AAGCTGACAC CTATATGCAG
GCACTTTTAG AGCCTTATGT TATATCAGAG GACAATATTT TGACTGATGA ATAA
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| Protein sequence | MGRFVPFSTA PKVERAILVG VDHGKSDWSL EESMDELERL TQTDGAEVFM RITQKLDAPV
PKTFIGKGKT EELVSLVKNT DADVVIFDDE LTPSQQSNLE KLLGEPVKVI DRTALILDIF
GIHARTKEGR LQVQLAQLQY VLPRLRGMWS HLVGEQTRGG IGSRFGQGES QLEVDRRLIR
KRISTLKNEL KQLGQRREIQ SKSRWNSGTF SVSLVGYTNA GKSTLLNQLT GADVYAKDEL
FATLDPTTRA LSLDEGRKIV LTDTVGFIQK LPTNLIESFK STLIEAQEAD LLLLVADATD
KNLSKEIAVV RSILKDIEAD KSDQVLVLNK VDLLSEQELQ MLKALYPDAV FISAQKGTGI
NGLLHKIQEI ASTGDKVVSA LIPFNKGALV KSVHERCQLL HEQYVAEGLL LSVKADTYMQ
ALLEPYVISE DNILTDE
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