Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0770 |
Symbol | |
ID | 8413635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 850041 |
End bp | 850694 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022352 |
Product | SOS-response transcriptional repressor, LexA |
Protein accession | YP_003179790 |
Protein GI | 257784573 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.953907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.283902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAAG GCAAACTTAG CAAGCGTCAA GCAGCAATTT ATGACTATAT CTGTTCCTAC ACAGATCAGC ATGGCTATCC CCCTTCAGTA AGAGAAATTG GTACTGCAGT TAACCTTGCG TCTCCTTCAA CAGTGCACAT GCATCTCAAA GTTCTTGAGC AGTTCGGACT TATTGATAGA GATCCAAAGA AGCCTCGTAC TATGAAGATT GTTTCTCAAG CTTCTAACGC CTCTGATACA GCAAAACTTG CCCCAGTGAC TCAAGATGTA GCTAATAACG TTATCAGCCT TCCTCTTGTT GGACGTGTTG CTGCAGGTAC GCCCATTCTT GCCGAGCAAA ACGTTGAAGA GTCGCTATCT CTTCCAACAA GTATTGTTGG AGATTCAAGC TCCTTTATTC TTCGTGTACG CGGAGAATCA ATGATTAACG CTGGCATTTT TGATGGTGAC TATATTGTTG TCAAAGAGCA GCAAGATGCT CATGATGGAG AAATTGTTGT CGCTCTCATT GATGACTCTG CAACGGTTAA AACGTTTTAC AGAGAAAATG ATCGCATTCG TCTCCAGCCA GAAAATGATT TTATGGAGCC AATCTACGTA AAAAATCCCG TTATTTTAGG TAGAGTTACT GCACTTATTA GGTCAATTTC ATAG
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Protein sequence | MPKGKLSKRQ AAIYDYICSY TDQHGYPPSV REIGTAVNLA SPSTVHMHLK VLEQFGLIDR DPKKPRTMKI VSQASNASDT AKLAPVTQDV ANNVISLPLV GRVAAGTPIL AEQNVEESLS LPTSIVGDSS SFILRVRGES MINAGIFDGD YIVVKEQQDA HDGEIVVALI DDSATVKTFY RENDRIRLQP ENDFMEPIYV KNPVILGRVT ALIRSIS
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