Gene Apar_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0770 
Symbol 
ID8413635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp850041 
End bp850694 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content42% 
IMG OID645022352 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_003179790 
Protein GI257784573 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.953907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.283902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAG GCAAACTTAG CAAGCGTCAA GCAGCAATTT ATGACTATAT CTGTTCCTAC 
ACAGATCAGC ATGGCTATCC CCCTTCAGTA AGAGAAATTG GTACTGCAGT TAACCTTGCG
TCTCCTTCAA CAGTGCACAT GCATCTCAAA GTTCTTGAGC AGTTCGGACT TATTGATAGA
GATCCAAAGA AGCCTCGTAC TATGAAGATT GTTTCTCAAG CTTCTAACGC CTCTGATACA
GCAAAACTTG CCCCAGTGAC TCAAGATGTA GCTAATAACG TTATCAGCCT TCCTCTTGTT
GGACGTGTTG CTGCAGGTAC GCCCATTCTT GCCGAGCAAA ACGTTGAAGA GTCGCTATCT
CTTCCAACAA GTATTGTTGG AGATTCAAGC TCCTTTATTC TTCGTGTACG CGGAGAATCA
ATGATTAACG CTGGCATTTT TGATGGTGAC TATATTGTTG TCAAAGAGCA GCAAGATGCT
CATGATGGAG AAATTGTTGT CGCTCTCATT GATGACTCTG CAACGGTTAA AACGTTTTAC
AGAGAAAATG ATCGCATTCG TCTCCAGCCA GAAAATGATT TTATGGAGCC AATCTACGTA
AAAAATCCCG TTATTTTAGG TAGAGTTACT GCACTTATTA GGTCAATTTC ATAG
 
Protein sequence
MPKGKLSKRQ AAIYDYICSY TDQHGYPPSV REIGTAVNLA SPSTVHMHLK VLEQFGLIDR 
DPKKPRTMKI VSQASNASDT AKLAPVTQDV ANNVISLPLV GRVAAGTPIL AEQNVEESLS
LPTSIVGDSS SFILRVRGES MINAGIFDGD YIVVKEQQDA HDGEIVVALI DDSATVKTFY
RENDRIRLQP ENDFMEPIYV KNPVILGRVT ALIRSIS