Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0767 |
Symbol | |
ID | 8413632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 848415 |
End bp | 848864 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022349 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut |
Protein accession | YP_003179787 |
Protein GI | 257784570 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.296419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.293813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATT TTGACATCCA GTTATCTATT AAACGCCTTG ATCCTACCGT TGAACTTCCT TCGTATGCTT ATACAGGAGA CGCTGGATTA GATCTTAGAA GTGCCGAAGA TGTTGATCTT GCTCCTTTTG AGCGCAAACT TATTTCTACT GGTCTAGCTA TTGCAATTCC TGATGGCTAT GCAGGATTTG TTCAGCCCAG AAGTGGACTT GCCTTTAAGA AGGGCCTTTC TATGGCAAAT ACTCCAGGTC TTATCGATGC TCATTATCGT GGTGAACTTA AGGTCTGTGC CATTAACCTT GATAGTAAAG AAACTATTCA TATTGAGCGT GGCGAGCGTA TTGCACAGCT TGTGATTCAA CAAGTTCCTG TTGTAGAACT TATTGAGGTT GATGAACTTG ATCAGACTGA TCGTGGTACT GGCGGATTTG GCTCAAGCGG CGTTCAATAA
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Protein sequence | MSNFDIQLSI KRLDPTVELP SYAYTGDAGL DLRSAEDVDL APFERKLIST GLAIAIPDGY AGFVQPRSGL AFKKGLSMAN TPGLIDAHYR GELKVCAINL DSKETIHIER GERIAQLVIQ QVPVVELIEV DELDQTDRGT GGFGSSGVQ
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