Gene Apar_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0746 
Symbol 
ID8413611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp828826 
End bp829590 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content35% 
IMG OID645022328 
ProductMethyltransferase type 11 
Protein accessionYP_003179766 
Protein GI257784549 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0193664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACT ATATAAAATT AAATCAAAAT AGATGGAATA ATGTAAAAAA TGACTATACC 
GAGCCGTTGA CACATGAGGA ATTAGAAGAA GTTAAAAATA ATCCAATTTC TGTCGCATTA
ACGGTTGGGA AAAAAGTTCC AAAAGAATGG TTTGGAAAAG CCAACGGAAA AAAGATATTA
GGTTTAGCTT GTGGTGGTGG ACAGCAAGGT CCAGTTTTTG CTGCAAAAGG TTATGACGTA
ACCATAATGG ATTTTTCTAC ATCACAATTA CAAAAAGATG AGATGGTTGC TAAAAGAGAA
GGCTTAAAAA TCAATACCGT TCAAGCTGAC ATGACAAAAC CATTTCCATT TGAAGATGAA
ACTTTCGATA TTATTTTTAA TCCAGTTTCG AATGTATACA TTGAAGACTT AGAAAACATG
TATAAAGAAG CAGCTCGCGT ATTGAAAAAG GGTGGGCTGT TAATGGTCGG CTTCATGAAT
CCTTGGACGT ACATGTATGA CGCTGACGTT GTATGGGACC ACCCCGATGA GGAATTACTT
TTAAAGTTTT CGATCCCTTT TAATTCAAAA GAGCTTGAAG AGCAGGGCAA AATAACCATA
GATCCAGAAT ATGGATATGA ATTTAGCCAT ACCTTAGAAA CTCAGATTAG AGGCCAACTT
AAAAATGGCC TTGCTATGAT AGATTTTTAT GAGTCATGTG ATAAAAGAAA TCGATTATCA
CAGTATGGAA ATGACTATAT TGCCACGCTT TGCATCAAGC TCTAA
 
Protein sequence
MNDYIKLNQN RWNNVKNDYT EPLTHEELEE VKNNPISVAL TVGKKVPKEW FGKANGKKIL 
GLACGGGQQG PVFAAKGYDV TIMDFSTSQL QKDEMVAKRE GLKINTVQAD MTKPFPFEDE
TFDIIFNPVS NVYIEDLENM YKEAARVLKK GGLLMVGFMN PWTYMYDADV VWDHPDEELL
LKFSIPFNSK ELEEQGKITI DPEYGYEFSH TLETQIRGQL KNGLAMIDFY ESCDKRNRLS
QYGNDYIATL CIKL