| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0731 |
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| Symbol | |
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| ID | 8413595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 810115 |
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| End bp | 810789 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022312 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_003179751 |
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| Protein GI | 257784534 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0365158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.685056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAACG TTCTGGTAGC ACCGTCTGTT CTATCTACAG ATTTTTCCAA GCTTAAAAGT
GAGCTTGATT CAATTGCAAA CGCTGATTAC ATTCATTACG ACGTCATGGA TGGTCACTTT
GTCCCTAATA TTTCCTTTGG TCCAGATATT TTCTCGTACT GCAAAAAGTC CTCTGATCTG
CCCATTGATG TCCACCTGAT GGTAACTAAT CCGGCTGAGA TTGCTCCTTT ATTCCTAGAC
CGTGGTGCTG ACGTTGTTAC CTTCCACTAC GAGGCCGAAC TTCATGCTCA TCGTCTCGTT
CACCTTATCA AGGATTCTGG CGCTAAGGCC GGTATTTCGC TTTGCCCGGG AACTCCTGTA
AGCGTTCTTG AGGATCTTAT CGAAGATCTT GATCTGGTGC TTATCATGAC AGTTAATCCT
GGCTTTGGTG GACAGAAGTT TATTCCTCAC TCAATTGAAA AGCTAAAGGC TCTTAAGGAA
CTCTGCCGTA AACACAACGT TAATCCTCTG ATTGAGGTTG ATGGTGGTAT CAGTGAAGCT
AATGCGGCTG ACGTTGTAGT TGCTGGTGCC AATATGCTTG TTGCAGGCAG TGCGGTGTTT
GGCCAGGTAG ATCGTGGTTC AACTATTGAG ACAATCCGCT CTGCTGGAGA GTCTGTTCTA
ACCATTCAGG GCTAG
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| Protein sequence | MNNVLVAPSV LSTDFSKLKS ELDSIANADY IHYDVMDGHF VPNISFGPDI FSYCKKSSDL
PIDVHLMVTN PAEIAPLFLD RGADVVTFHY EAELHAHRLV HLIKDSGAKA GISLCPGTPV
SVLEDLIEDL DLVLIMTVNP GFGGQKFIPH SIEKLKALKE LCRKHNVNPL IEVDGGISEA
NAADVVVAGA NMLVAGSAVF GQVDRGSTIE TIRSAGESVL TIQG
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