Gene Apar_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0729 
Symbol 
ID8413593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand+ 
Start bp808430 
End bp809092 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID645022310 
Productprotein of unknown function DUF205 
Protein accessionYP_003179749 
Protein GI257784532 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.382163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.327374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGAA TTGTTGTTGC TCTGATTTTT GGACTTATTG CATTTGGTTT TGGTAGCATT 
CCATTTGGCT TGATTATTGC AAGCGTTATG GCTCATGAGG ATATTCGTAA GCTTGGATCA 
GGGAACATTG GAACTACCAA TGTGGCTCGC AATGCTGGTA AAGCCGCGGG TATTTTTACG 
CTTTTGTGTG ACGCAGGTAA AGGCATTATC AGTGTCATGT TGGTCCGTTG GTTCTTGTCT 
ACCCAGGGAT TTACTCCTGT TATTACAGGA AATACATCCG CTGAAGCTGA ACTCATCATT 
TCTTTTGTGT ATGCCTGTTG TGTGCTTGGT CATATTTTCT CACCCTGGCT TCATTTTCAT 
GGGGGTAAGG GAATTGCTGT TGGATTTGGC GGTGGTCTGG CGGTTAATCC GCTTGCTGCC 
TTAGTAGCTC TTGCAGTGTT TATCACACTT GCAGTGCCAA CTAAATATGT ATCTCTCGGT 
TCCATTGGCG CAGCAGTAGC TATACCTCTT TTTTGCCTTT TATTTGGCAT GGATCCAGTA 
GCTACTATCC CCGTATTTGT AGTAGCTATT GCGGTTATTT GGGCTCATCG CGAGAATATC 
AAAAAACTTA ATGCTGGTAA CGAGCGTAAA TTTTCATTTG GTGATAAGAA AAAGGACAAG 
TAA
 
Protein sequence
MSGIVVALIF GLIAFGFGSI PFGLIIASVM AHEDIRKLGS GNIGTTNVAR NAGKAAGIFT 
LLCDAGKGII SVMLVRWFLS TQGFTPVITG NTSAEAELII SFVYACCVLG HIFSPWLHFH 
GGKGIAVGFG GGLAVNPLAA LVALAVFITL AVPTKYVSLG SIGAAVAIPL FCLLFGMDPV 
ATIPVFVVAI AVIWAHRENI KKLNAGNERK FSFGDKKKDK