| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0727 |
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| Symbol | |
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| ID | 8413591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 805676 |
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| End bp | 807058 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022308 |
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| Product | protein of unknown function DUF512 |
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| Protein accession | YP_003179747 |
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| Protein GI | 257784530 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1625] Fe-S oxidoreductase, related to NifB/MoaA family |
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| TIGRFAM ID | [TIGR03279] putative FeS-containing Cyanobacterial-specific oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0961895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACAGC GCGCAGACTA CGGAAATACA AAATCTGGTG GGCTTGGTGC ACTCATCGAG
TCTGTTGAAG AGGGTAGTCC TGCGTGGAAG GCTGGCCTTG AGCCAGGCAT GATTATCGAG
AAGGTCAATG GCGTAGTACC AAAAGACCTG ATTGATTGGC GTTGGGAAGC TGACGGCTCT
ATCTGTGAGC TTGAAGTTTC TGTTCCTGGT GATGATGAGC TCTATGAGTG CGTGCTTGAA
CGTGAGTCTG GAGAAGACTG GGGCGTTGAC TTTGTTGACG TGCTCTTTGA CGGCATCAAG
ACCTGCGTAA ACGCTTGTCA GTTCTGCTTT ATGGCCATGC TGCCAGAAGA CATGCGTCCT
TCACTTTCTA TTAGAGATGA CGATTATCGC CTGAGTTTCT TGCAGGGCAA TTTTGTTACC
CTCACTAACC TCACTGATGA GGATGTTGAG CGCATCATTT CTCATAAGCT TGAGCCTATG
AACGTCTCGC TGCATGCAAT TTCATCTGAT GTCCGTCGCA ATCTTATTGG TCCTCATGCT
GCTCGAGGTA TTGAAGTTCT TAAGAAACTT ATGGATGCTG GAATTGAGAT TCATGGTCAG
ATTGTCCTGT GTCCTAATAT CAATGACGGT GAAGAGCTTG ATAAAACACT TGATTGGGTA
GAGGCTCATC AGCAGATTAC CTCTTTAGCC ATTGTTCCGC TTGGCTATAC CAAAGACTCC
AAGCGCTTTA CGCATTCTTA TTCTGATGAC GTAGAGCTGT CCCGCTCTGT AGTCAAAATT
GTTGAGCCAT ATCAGGAGCG TGCGCATGCT TCTTTAGGTA TTACACGCTT TCAGCTCTCT
GACGAGTTTT ATGTAGATGC TCAGCTTCCT ATTCCACCTG CATATACGTA TGACGGCTAC
CCACAGTTCT ACGATGGCAT TGGTATGCTC AGAAGCTTCC TCGACGAGGC TGAAGAGGTC
TGCAACTCTA TGCGTACCGC TCTCGATGAG GCAGATACCT ATCTTTCTGT CCGATCTCGC
AAGATTTTGC TAATCGTAGG CGAAGCTGCT CAACAAACTA TTCAGACTTT TTGCGACAAC
TGGTCAGCTA ACGGAAACGT TTCTACCTTT GCCGTGCGCA ACGATTTCTT TGGTGGAGAC
GTTAATGTCA CAGGGCTTAT CTGCGCCGTT GATCTTCTCG CCCAGGTACC AGAGGACCTT
ACTAACGTTT TGATAGTACT TCCTGAGGTC ATGTTTAACT TTGACAAAGT TACTCTTGAT
GGCATGTCAC TGGCCGATTT AACTGCGCAG CTAGAGACTC GCGGAGCAAA GGTAATCATG
TCAATTCCTG GTCCCACAAA TATTGCCAAG TCTTGCATTA AAGCACTCAA AGAGTGGGAT
TAG
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| Protein sequence | MEQRADYGNT KSGGLGALIE SVEEGSPAWK AGLEPGMIIE KVNGVVPKDL IDWRWEADGS
ICELEVSVPG DDELYECVLE RESGEDWGVD FVDVLFDGIK TCVNACQFCF MAMLPEDMRP
SLSIRDDDYR LSFLQGNFVT LTNLTDEDVE RIISHKLEPM NVSLHAISSD VRRNLIGPHA
ARGIEVLKKL MDAGIEIHGQ IVLCPNINDG EELDKTLDWV EAHQQITSLA IVPLGYTKDS
KRFTHSYSDD VELSRSVVKI VEPYQERAHA SLGITRFQLS DEFYVDAQLP IPPAYTYDGY
PQFYDGIGML RSFLDEAEEV CNSMRTALDE ADTYLSVRSR KILLIVGEAA QQTIQTFCDN
WSANGNVSTF AVRNDFFGGD VNVTGLICAV DLLAQVPEDL TNVLIVLPEV MFNFDKVTLD
GMSLADLTAQ LETRGAKVIM SIPGPTNIAK SCIKALKEWD
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