| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0725 |
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| Symbol | |
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| ID | 8413589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 803272 |
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| End bp | 804816 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022306 |
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| Product | cytidylate kinase |
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| Protein accession | YP_003179745 |
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| Protein GI | 257784528 |
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| COG category | [F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0283] Cytidylate kinase |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase
[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0311607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0975143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTG CTATCGATGG CCCAGCAGGC TCCGGAAAGT CTACGGTTGC TCGCGCACTT
TCTGATCGCT TGAATCTAAT TTTTTTAGAT ACAGGCGCAA TGTATCGCTC GGTAACTGTG
GAATGCCTGC GTCAGGGCAT TGATATGACT GATACCGAGA AAATCATTCA GGTTGCACGA
AACATCAGCA TCTCATTTGG CAATTCTGCA AATGGTCAGA CCGTCTACGC AAACGGCTCA
AACGTCACCA CAGAGATTCG TACTCCTGAG GTAGACAGAA ATGTCAGTGT TGTTGCAGCT
ATTCCCGAGG TTCGCGAGGC AATGGTTACA CTCCAGCGTC GTGCTGGCGA GAATGGCGAT
GTAGTCGCAG AGGGCCGTGA CATTGGTACT GTGGTATTTC CAGAGGCTGA TGTAAAGGTC
TTCTTGACTG CAGATCCTGC TGCTCGTGCT CACCGTCGCG CTGTTCAACG CCAAGGTAGA
GATGCAGCTA CAGGTAACGA TGCTAAGGTA GATGCCAAGA GTGAGGAGAA GATCCTCGAA
GACATCAAGG CTCGTGATAA GGCTGACTCT GAGCGCAAGG CAGCACCACT TCGTGCAGCA
GAAGACGCCC ATCATATTGA CTCTTCCACG CTTTCTGTTG AAGAGGTTAT TGCAGCCATT
ATTGCCCTGC ATCCGGGCTT GGGTAAAAGA GATACTCGGA ACCACAGATC TTCTCACCAG
GGAAAAGGAT CAGAAGGTAG TTCTTCTGAT GACGGGAAGT CTCACACGGA AGAGCCTAAG
CGCTCCGAAA AAAAGTCTTC TATAGCAGCG GCGTCTAAGC GTTTGCGTCC TTTTGGCGGC
AACTCATTTG ATGATTATTA CGATACGGCG CTTGGTGATT TTCCAGCTCC AGCCAAGTTT
TTTAAGTGGC TGGCAATAAG TGTTCTTGGT CTGATTACAA AAGTCTGGTT CAGGTGGCGT
TGGGACAAAG ACGAGCTCTT TGTGGGCGAT AAAACCCCTC GCGTTCTTAT CATGAATCAC
CCAACATTTC TGGATCCTAT TGTTACCGTT GTTCACTTGC TTGTTCATGG CATTCCTGTT
CGAACCATCT ACAAGAGTGA GTTCAACAAA TTCAAACCGC TTCAATGGGC ACTCTCTAGG
CTTGGTGGTA TTCCTGTTGA CCGTGGAACT GCCGATATGA AGGCAATTCG TCGTGCAACT
ACAGCGCTTT CTAGGGGAGA AATGCTTCTT ATCTATCCTG AAGGTACAAG AGTCAGAAGC
AATACTGAGC GTGGAGAAAC ACATGGTGGT TTTGCTCTTA TTGCTCAGCT TGCTAAGGTA
GATGTTCAGC CACTGGCAAT TATTGGTGCG CTTGATATTA AGAAAAAAGG CTCTCCTCTG
GTTAAGCCTG TTAAGGTTTA TCTTCGCGCT GGTCAGAAGA TTTCTTTTAG TGATTTGACT
TCTACTAAGC GTAAAGATCA GGCAAAAGAG ATGGAAGAAA GAGCCATGGA GCGGGTATAC
GAGCTAAGAG ATGCAATGCT CAAAGAGCAT CCCGGAAGGA ATTAG
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| Protein sequence | MIVAIDGPAG SGKSTVARAL SDRLNLIFLD TGAMYRSVTV ECLRQGIDMT DTEKIIQVAR
NISISFGNSA NGQTVYANGS NVTTEIRTPE VDRNVSVVAA IPEVREAMVT LQRRAGENGD
VVAEGRDIGT VVFPEADVKV FLTADPAARA HRRAVQRQGR DAATGNDAKV DAKSEEKILE
DIKARDKADS ERKAAPLRAA EDAHHIDSST LSVEEVIAAI IALHPGLGKR DTRNHRSSHQ
GKGSEGSSSD DGKSHTEEPK RSEKKSSIAA ASKRLRPFGG NSFDDYYDTA LGDFPAPAKF
FKWLAISVLG LITKVWFRWR WDKDELFVGD KTPRVLIMNH PTFLDPIVTV VHLLVHGIPV
RTIYKSEFNK FKPLQWALSR LGGIPVDRGT ADMKAIRRAT TALSRGEMLL IYPEGTRVRS
NTERGETHGG FALIAQLAKV DVQPLAIIGA LDIKKKGSPL VKPVKVYLRA GQKISFSDLT
STKRKDQAKE MEERAMERVY ELRDAMLKEH PGRN
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