Gene Apar_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0724 
Symbol 
ID8413588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp802562 
End bp803272 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content45% 
IMG OID645022305 
ProductPhosphoglycerate mutase 
Protein accessionYP_003179744 
Protein GI257784527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0153538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0816175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAT TTGAAATTCC AGCTCAGGTT CATCGTATTT TGTTTATGCG TCATCCAGAA 
AGCGTAGCTA ATACACAGCG CTTTTTTAGC GGCAGAAGAA ATGTTGAGCT CACTGAGCAT
GGCGTTGAAC AGCGTGAGCA TGCTGTTCGC GCGCTTGTTG CATTTAATCC AGATAGAATT
TGGACCTCTC CTTTATCTCG CTGCAAAGAC ATGGCTGAGA TGGCCGCTTC TCAGCTTGGC
GTTCCCTGTG AGGTCAAAGA TGATCTTGCA GAGATGGATT TTGGCATTCT GGAGAGTAAG
CGCTTTGTTG ATGCTGAAGA GATTCTTAAG CCGTATGGTC TCACGTTTCC TTGGAGCTCA
GATGAAAACG GTCACTCTAT ACCTGCTCCA GAAGCTGAGT CATATGAGCA GGTACGATGC
AGGTGCCGTA ACATTCTTAA CGAGTTTTCT GGTCTTTCTG GACGCACCGT TTGCATTTCT
CACGGTGGTT ATTTGCGCTC TATGATGGCT GAAATTTTTG GTATTCCAGG CAGTTTAAGC
TGGAACGTAC ATCTTGCAAA TGTCTCTTCA ATCTTCTTTA CTAGTACAGG TGGTTCAGAT
TTTAAGCTTG GTGGATTTAA CCTTGATCCA GAAGAGGTTA TTCGTCGTTC CACTAAGTCA
AGTTTTTACG ATTTTCGTGA CATTTGGGGT GTCACCGAGG GGGATAAGTA A
 
Protein sequence
MQPFEIPAQV HRILFMRHPE SVANTQRFFS GRRNVELTEH GVEQREHAVR ALVAFNPDRI 
WTSPLSRCKD MAEMAASQLG VPCEVKDDLA EMDFGILESK RFVDAEEILK PYGLTFPWSS
DENGHSIPAP EAESYEQVRC RCRNILNEFS GLSGRTVCIS HGGYLRSMMA EIFGIPGSLS
WNVHLANVSS IFFTSTGGSD FKLGGFNLDP EEVIRRSTKS SFYDFRDIWG VTEGDK