Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0724 |
Symbol | |
ID | 8413588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 802562 |
End bp | 803272 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022305 |
Product | Phosphoglycerate mutase |
Protein accession | YP_003179744 |
Protein GI | 257784527 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0153538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0816175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCAT TTGAAATTCC AGCTCAGGTT CATCGTATTT TGTTTATGCG TCATCCAGAA AGCGTAGCTA ATACACAGCG CTTTTTTAGC GGCAGAAGAA ATGTTGAGCT CACTGAGCAT GGCGTTGAAC AGCGTGAGCA TGCTGTTCGC GCGCTTGTTG CATTTAATCC AGATAGAATT TGGACCTCTC CTTTATCTCG CTGCAAAGAC ATGGCTGAGA TGGCCGCTTC TCAGCTTGGC GTTCCCTGTG AGGTCAAAGA TGATCTTGCA GAGATGGATT TTGGCATTCT GGAGAGTAAG CGCTTTGTTG ATGCTGAAGA GATTCTTAAG CCGTATGGTC TCACGTTTCC TTGGAGCTCA GATGAAAACG GTCACTCTAT ACCTGCTCCA GAAGCTGAGT CATATGAGCA GGTACGATGC AGGTGCCGTA ACATTCTTAA CGAGTTTTCT GGTCTTTCTG GACGCACCGT TTGCATTTCT CACGGTGGTT ATTTGCGCTC TATGATGGCT GAAATTTTTG GTATTCCAGG CAGTTTAAGC TGGAACGTAC ATCTTGCAAA TGTCTCTTCA ATCTTCTTTA CTAGTACAGG TGGTTCAGAT TTTAAGCTTG GTGGATTTAA CCTTGATCCA GAAGAGGTTA TTCGTCGTTC CACTAAGTCA AGTTTTTACG ATTTTCGTGA CATTTGGGGT GTCACCGAGG GGGATAAGTA A
|
Protein sequence | MQPFEIPAQV HRILFMRHPE SVANTQRFFS GRRNVELTEH GVEQREHAVR ALVAFNPDRI WTSPLSRCKD MAEMAASQLG VPCEVKDDLA EMDFGILESK RFVDAEEILK PYGLTFPWSS DENGHSIPAP EAESYEQVRC RCRNILNEFS GLSGRTVCIS HGGYLRSMMA EIFGIPGSLS WNVHLANVSS IFFTSTGGSD FKLGGFNLDP EEVIRRSTKS SFYDFRDIWG VTEGDK
|
| |