| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0704 |
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| Symbol | |
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| ID | 8413565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 782946 |
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| End bp | 783863 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022282 |
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| Product | integrase family protein |
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| Protein accession | YP_003179724 |
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| Protein GI | 257784507 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000143659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000274126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGGCATTT CTAAAGTGCA GAGTAACCAA GTTGAACAAT TCATTGAGTA TTTACATAAG
GTTAGAAATC TCTCCGAGAA TACTTTGAGG TCTTATCAAA CTGACCTTTT ATCATTTGCG
CAGTGGTGTA GTAGAGAAAA TGTTGATTTA ACTCAAGTTG ATCATAAAAA TCTTCGTTTG
TATTTGGCCT ATCTCAAACA AGCTCAATAT TCAGCTAAAA CGCTTAACAG GCATCTATCG
GCGTTGCGTG GCTTTTACAA ATGGATGCAG CGAGAAAAAC TGATTGCTAC TGATCCTGCT
CTTGCACTTA GTAATCCCCG AGCTCCACGC AATCTTCCAC ATACCATGAC TGATTCTGAT
GTGAATAGAC TTTTGGAATC ATGTGACGTT TCAACTGCAG CAGGTCTCAG AGATAGAGCA
TTTCTTGAGT TTTTGTACGC AACAGGTGCT CGTATTTCTG AGGTAGCAAC GCTCAGACTT
GAGCAGGTTG ATCTACAAAA TGGAACAGTA CGTCTATTTG GTAAAGGTTC TAAAGAGCGG
ATTGTTCCGC TTTATGAGTC TGCAATTGAG TGGCTTAAGA AATATCTTAG ATCTTCTCGC
CCTACGCTTT TACTAAAAGA TAAAACAGGA CGCGTACATT CAGCTCTTTT TATTTCCGTA
AGAGGAAATA ACATGAGCGC AGATTCATTG CGCAAGGTTT TCTCGTCATA TTTAACGGCT
GCAGGACTGG ATAGCTCACT ATCACCACAT GCCATGAGGC ATACATATGC TACGGAGCTT
CTTGGTGGCG GAGCAGATCT ACGTATTGTG CAGGAGCTAT TGGGACATGA GTCTCTTTCA
ACTACGCAGG TTTATACACA TCTTTCGGTT GATAGACTTA AAGAAGCGGC GAAGGCAGCT
CATCCAAGAT CAAAATAG
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| Protein sequence | MGISKVQSNQ VEQFIEYLHK VRNLSENTLR SYQTDLLSFA QWCSRENVDL TQVDHKNLRL
YLAYLKQAQY SAKTLNRHLS ALRGFYKWMQ REKLIATDPA LALSNPRAPR NLPHTMTDSD
VNRLLESCDV STAAGLRDRA FLEFLYATGA RISEVATLRL EQVDLQNGTV RLFGKGSKER
IVPLYESAIE WLKKYLRSSR PTLLLKDKTG RVHSALFISV RGNNMSADSL RKVFSSYLTA
AGLDSSLSPH AMRHTYATEL LGGGADLRIV QELLGHESLS TTQVYTHLSV DRLKEAAKAA
HPRSK
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