| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0702 |
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| Symbol | |
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| ID | 8413563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 780717 |
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| End bp | 781592 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022280 |
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| Product | SMF family protein |
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| Protein accession | YP_003179722 |
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| Protein GI | 257784505 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000212454 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000268506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGAGAGAT GGGAGATTTC ATCAGAAGAT GAGGACTATC CAAGCGAGCT GTTACTGCTA
AATCATCCGC CTGAAATAAT CTATGGAATG GGGGATAGAA GCGTTTTGCA ATCACCTTGT
ATGTCTGTAA TTGGAGCTCG TCGAGCTACT CCATACGGTA TAGCAATTGC AGAAATGGCT
GGCAGATGTG CTGCTGATAA TAATATTGTT GTGGTATCTG GTGGAGCTCT TGGCTGCGAC
AATGCGGCGG GTATGGCTGC GCTTAACGCT GGAGGAAAGA CTGTTGTGGT AGCAGGTTGT
GGTGCAGATG TAACCTATCC AACTACTTCG TTAGATCTTT TTGAAGCTGC GCGAGAAGGA
AAGGGAGCAG TCATTTCTTT AGATAGATGG GGAACGCCAC CTAGACGTTA TGCGTTTCCT
AGAAGAAATG CGGTAATTGC GGCATTGGGC AAAGTGTTAT TGGTGACTGA AGCGGGTCTT
TGTTCAGGTA CGATGAGTAC TGCCGAGTTT GCCAACTCGC TTGGTAAAAC TATTTATGCG
ATACCTGGAT CTATCTTTTC CCTGGCTTCT GCTGGTACTA ATAGATTAAT CTCTGAAGGA
GCTCAAATCA TTCCTGATGA GACATCATTA GGCATCGCAA TCTCATTAGA TTATGATTGT
CTGGTTCGGG AACAAATGAA GCAAGATAAG AAGTTAACAC CGCTTTTATC TGCGCTTATA
GCATCACCAT CAAGACCAGA AGAGCTTGCA TGGAGGTTAT CGGAAAACGT ACTTACCGTG
CTTAATTCTT TAACTGATTA TGAAGCTCGT GGAATGGTAA AAAGATTACC GGATGGAAGG
TATACTCCTT CTAAAGAGTT TTATTTGGAT TCGTAG
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| Protein sequence | MERWEISSED EDYPSELLLL NHPPEIIYGM GDRSVLQSPC MSVIGARRAT PYGIAIAEMA
GRCAADNNIV VVSGGALGCD NAAGMAALNA GGKTVVVAGC GADVTYPTTS LDLFEAAREG
KGAVISLDRW GTPPRRYAFP RRNAVIAALG KVLLVTEAGL CSGTMSTAEF ANSLGKTIYA
IPGSIFSLAS AGTNRLISEG AQIIPDETSL GIAISLDYDC LVREQMKQDK KLTPLLSALI
ASPSRPEELA WRLSENVLTV LNSLTDYEAR GMVKRLPDGR YTPSKEFYLD S
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