Gene Apar_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0699 
Symbol 
ID8413560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp777717 
End bp778490 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content42% 
IMG OID645022277 
ProductRibonuclease H 
Protein accessionYP_003179719 
Protein GI257784502 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000499736 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000400312 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGATT CTGCTAAAGA TATAATTGCT CGTTTAAGTG ACGCACCAGA AGCTGAAGCA 
TACGAACTCA TAGCTCGTTA TAGTGAAGAT CCTCGTAAAC AGGTTATTAA GGCTTTGGAA
TCAGCTAAAA AGCGCATTGA AAAAGAACAT GTTGAGAAAA TCCGTGTAGA AGAAATGTAT
CGCTTTCAGA AAGAATTTTC TGGGGGTGGA CTTGTTGTTG GCGTAGATGA GGTTGGCAGA
GGCTCTGTAG CTGGACCTCT AACGGTCTGT GCTGTATGTT TACCAGATGA ACCTATCATC
TATGGTCTTA ATGATTCCAA GAAACTCACT GCAACAAAGC GAGAGATTCT TGCTGAACAA
ATTCAAGAAG TAGCTACAGC CATTGGCATT GCTCACATTT CGCCTCAAAG AATTGATGAA
GTTGGTATGG CGCAGTGCCT AAGAGACGCT ATGCTGCAAG CTGTTAAAAA CACAGGTATT
GAACCTGACT GCGTGTTGAT TGATGGAAAT CCTATGCACA TTCATCCCAA AGAGAAGACT
CTTGTCAAAG GTGATGCTCG CATTGCGTCT ATTGCTGCCG CTTCAATTGT GGCAAAAGTA
ACGAGAGATG CTCTTATGGT AGCCTATGAT GAGGAATATC CAGGCTATTA TCTGGCAGAA
TGTAAAGGAT ATGCCTCTGC TGAACACATT AAGGCTATTG GCGAGAAGGG ACTTTCTCCT
ATACATCGTG CATCGTTTTG TGGAAACTTT GTTAAGACGC AGAGACTGTT TTAA
 
Protein sequence
MADSAKDIIA RLSDAPEAEA YELIARYSED PRKQVIKALE SAKKRIEKEH VEKIRVEEMY 
RFQKEFSGGG LVVGVDEVGR GSVAGPLTVC AVCLPDEPII YGLNDSKKLT ATKREILAEQ
IQEVATAIGI AHISPQRIDE VGMAQCLRDA MLQAVKNTGI EPDCVLIDGN PMHIHPKEKT
LVKGDARIAS IAAASIVAKV TRDALMVAYD EEYPGYYLAE CKGYASAEHI KAIGEKGLSP
IHRASFCGNF VKTQRLF