| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0694 |
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| Symbol | |
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| ID | 8413555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 770421 |
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| End bp | 772508 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022272 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_003179714 |
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| Protein GI | 257784497 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.7209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000422359 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAGG TTAGAGACTT CCTTTTTGAG ATTGGTTCTG AAGAGATGCC TTCTGCTCCG
TTGCAGAAAG CTATTGCTCA GTTTAATAAG CTTGTAGTTT CTGGACTCAA AGACTCTGGT
TTGTCATTTG GAGAGGTTAA GATTCTCTCG ACGCCTCGTC GTTTAACTGC CTACGTTAAG
GATGTTGCTG AGGCTACAGA AGAGATTTCT GAGGTTAAGC GTGGTCCTAA GGCAGAGATT
GCCTTTGACG CAGAGGGCAA TCCAACCAAA GCTGCTGAGG GATTTGCTCG TAAGTGCGGT
GTTAATGCTA ATGCGCTGAC TCGTCGTGTA GATACTGATG GTCATGAGTA CGTATTTGCT
GAGCTCAATA TTCCTTCTGT TCCTGCTACA AAAATTCTCT CTGAGTTGGC AACCTCTTGG
ATTTCTGCTC TTGATTGGCC TCGCAGTCAG CGCTGGGGTT CTTTCCATGA GCGTTACGTT
CGTCCTGTCC GTTGGCTTTG CGTATTGTTT GGATCAGAGA TTGTTCCAGT AACCTATGCT
GATGTAACCA GCTCAAACAC TACTCAAGGT CATCGCGTTC TTGGACCTGG CTGTCATGAG
GTTGCATCTC CTGCAGATTA TGAGCAGGTT CTAAAAGATG CTGGTGTTTT GCTGCAGGAG
CAGAGAAAAG ACGTTATTCT CGCTGGTATT AAAGAGGTTG AGGCTGCTCG TCCAGGATCA
CACGTTGATA TGCCAGAGAA AGTCTTTGAG GAGGTCATCA ACCTTACTGA GTGGCCTCAG
GTTCTTGTGG GTACCTTTGA CAAGGAATTC CTTAACGTTC CATCAGAGAT TATTACTGAG
TCTATGCTTT CTAATCAGCG TTATTTTCCA ATTTATGACG CTGAGGGCAA ACTGACTCGT
GAGTTTATCG TGGTGTCTAA TGCAGATCCA ACGTGCGCAG AGCGTGTTAT TGACGGCAAC
GAGCGTGTTG TTCGTGCTCG TCTTGACGAC GCTAAGTTCT TCTTTGAAGA GGACTTGAAA
CACTCCCTTG ATGAGTTTGC TCAGCGTCTT GAGACTGTTG TTTTCCAGGA GAAGCTTGGC
ACAGTTTTGC AGAAGACCCA GCGTATGGAG GCTCTTGCCG CAGAGATTGC GCTCGATGAG
ACATCGAGCA AAGAGAAGGC AGAGCTTGCT GCACGTGCTG CTCATCTTGC AAAGGCAGAT
CTTGTCAGCC AGGCAGTTGT TGAGTTCACT AGCCAGCAGG GTGTCATGGG TGGCTATTAC
GCAGAAGCTG CTGGCGAGAA AAGCGATGTA GTTGCAGCTA TTCGAGAGCA CTATCGTCCT
CGCTTTGCCG GTGACGAGCT TCCAAGTGGC CAGATTGGTC GCTTTGTAGC TATCGCTGAT
AAGCTTGATA CCATCTGCGG TATCTTTGCC ATCAACGAAC CACCAACCGG CTCTTCCGAC
CCTTACGCTG TTCGTCGCGC TGCAATCGGT GTCATCGCAC TGGTCCGCTC AACTTCCAAC
CTTAATCTCA AGAAGCTCAT TGCAAGTTCT TTGGAGCTTT ACCGTCAACA GGGTCTTGTT
GTTGATGAGT CGGTTCAGTC TCAGATAGAG CAGTATTTTA TCGGTCGTCT TGCATCTATT
GCTAAAGACG AGAAGATCTC TGCAGATGCT ATTGAGGCTG TAAGTGCAAT TGGCGTTATC
GATCCTGACG AGTTCCTTCT TCGTGCCCGC GCACTTGATG AGGCGCGTCA AAACGAGCCT
GAACTTTTTG AGGATCTTGC CACTGCTTAT GCGCGTGCAG CTCACTTAAG TGACACCTCT
CTTGGTACAG AGGTTGATAC TGCGCTTTTA ACTGAGCCAG AGCTGTCTGT GCTTGCCGCA
TGCGAAGAAG GACAGAAGCA GGTAGCTTCT GCACTTGCTG GTGCAGATTA TGCAGCTGCT
GTTTCGGCTC TGTCACAACT GCGTGAGCCA ATTGATATTT TCTTCGACAA AGTGCTTGTC
ATGGATGAAA ATGATACCGT TCGCCGAAAT CGTCTACGTC TTTTGAACAA GTTTTCCCAG
GTATTTAGTA ATGTCGCCGA TATTAGTGTG CTTTCTCGTA AGAAGTAG
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| Protein sequence | MAEVRDFLFE IGSEEMPSAP LQKAIAQFNK LVVSGLKDSG LSFGEVKILS TPRRLTAYVK
DVAEATEEIS EVKRGPKAEI AFDAEGNPTK AAEGFARKCG VNANALTRRV DTDGHEYVFA
ELNIPSVPAT KILSELATSW ISALDWPRSQ RWGSFHERYV RPVRWLCVLF GSEIVPVTYA
DVTSSNTTQG HRVLGPGCHE VASPADYEQV LKDAGVLLQE QRKDVILAGI KEVEAARPGS
HVDMPEKVFE EVINLTEWPQ VLVGTFDKEF LNVPSEIITE SMLSNQRYFP IYDAEGKLTR
EFIVVSNADP TCAERVIDGN ERVVRARLDD AKFFFEEDLK HSLDEFAQRL ETVVFQEKLG
TVLQKTQRME ALAAEIALDE TSSKEKAELA ARAAHLAKAD LVSQAVVEFT SQQGVMGGYY
AEAAGEKSDV VAAIREHYRP RFAGDELPSG QIGRFVAIAD KLDTICGIFA INEPPTGSSD
PYAVRRAAIG VIALVRSTSN LNLKKLIASS LELYRQQGLV VDESVQSQIE QYFIGRLASI
AKDEKISADA IEAVSAIGVI DPDEFLLRAR ALDEARQNEP ELFEDLATAY ARAAHLSDTS
LGTEVDTALL TEPELSVLAA CEEGQKQVAS ALAGADYAAA VSALSQLREP IDIFFDKVLV
MDENDTVRRN RLRLLNKFSQ VFSNVADISV LSRKK
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